|
Name : NT08PM_0216 (NT08PM_0216) Accession : YP_006239134.1 Strain : Pasteurella multocida 3480 Genome accession: NC_017764 Putative virulence/resistance : Virulence Product : protein RfbP Function : - COG functional category : - COG ID : - EC number : - Position : 208523 - 209125 bp Length : 603 bp Strand : - Note : RfbP DNA sequence : ATGCTAAAACGTTTTCTCGATATTGTGATTTCAGCCACTGCGCTAATTTTACTTTCCCCCCTATTTTTAATTATTGCTTA TCAAGTAAGAAAAAATCTAGGGACGCCTATTTTATTTCATCAGATGCGCCCTGGGCGATATGGTAAAGCATTTAACATGA TCAAATTCCGCACAATGAAGGACAGCAGAAATGAAAAAGGCGAACTTTTACCTGATAGTGAACGATTAACACCTTTTGGT CATTTCCTACGTTCAAGTAGCCTAGATGAGTTACCGGAATTATGGAATGTCTTAAAAGGCGATATGAGTTTAGTTGGACC TCGTCCTCTCTTAATGGAATATCTCCCCTTATACAATGCTGAACAAGCTAAACGGCATAACGTGCGCCCCGGCATTACCG GTTATGCCCAAGTTAACGGGCGTAATGCAATCAGTTGGGAACAAAAATTCAAATTAGATGTTTGGTACGTAGAAAATCAA TCGTTGTGGCTAGATATCAAGATTCTCTTGAAAACCCTCAACGTCGTCATTTTTCGCAAAAATGTTAACGATCAATCGGG GCATTCGATGCCGAGATTTTTAGGTGATACGGAGAAAAAATAA Protein sequence : MLKRFLDIVISATALILLSPLFLIIAYQVRKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-25 | 42 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 1e-25 | 42 |
