Name : NT08PM_2041 (NT08PM_2041) Accession : YP_006240901.1 Strain : Pasteurella multocida 3480 Genome accession: NC_017764 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2118887 - 2121454 bp Length : 2568 bp Strand : + Note : - DNA sequence : ATGAATATCGAAAAATTTACGACAAAATTTCAACAAGCGCTGCAAGAGGCGCAATCTTTAGCCATTGGCAAAGATAACCA ATTTATTGAACCCATCCATTTACTCACCGCCTTGTTAAATCAACAAGGTGGTTCCACTGCGCCAATTTTAACGGCAAGTG GGGCAAACTTACCGCTCTTGCGTAATGAATTAAATGCCGAGCTCAGTAAATTACCACAAGTGTCAGGCAGCGGTGGTGAT GTACAAGTTTCACGGAGTTTAGTGAATCTATTAAACTTGTGCGACAAGTTAGCACAGCAACGCCAAGATAAATTTATTTC CTCTGAATTGTTTTTACTGGCAGCGTTAGAAGACAAAACACTTGGTGATGTGTTGAAAAAGTGCGGTGTGAAAAAAGAAA ATTTACAACAGGCAATAGAGAAAGTCCGTGGCGGACAAAATGTAAATGATCCAAATGCGGAAGAAAGTCGCCAAGCGTTA GAAAAATATACGATTGATTTAACGGCGCGTGCAGAAAGCGGCAAACTTGACCCCGTGATTGGGCGTGATGAAGAAATTCG TCGTGCCATTCAAGTATTACAACGCCGTACCAAAAACAACCCAGTGTTAATCGGTGAACCGGGCGTGGGGAAAACTGCGA TTGTAGAAGGGCTGGCGCAACGCATTGTTAATGGTGAAGTACCCGAAGGCTTGAAAAATAAGCGCGTTCTGTCTTTAGAT ATGGGGGCATTGATTGCTGGTGCAAAATACCGTGGTGAATTTGAAGAACGTTTAAAAGCGGTGTTAAATGAACTGTCAAA AGAAGAAGGACGCGTGATTCTCTTTATTGATGAAATTCACACCATGGTGGGGGCAGGGAAAACCGATGGCGCGATGGATG CCGGTAACTTGCTCAAACCAAGCTTAGCCCGTGGGGAATTACACTGCGTGGGGGCAACAACGCTAGATGAATATCGTCAA TACATAGAGAAAGATGCCGCCCTTGAGCGTCGTTTCCAAAAAGTGTTTGTTGGTGAGCCAACGGTGGAAGATACCATTGC GATCTTACGTGGGTTAAAAGAACGTTACGAAATCCACCACCATGTTCAAATTACTGACCCTGCGATTGTGGCGGCAGCGA CCCTTTCTCATCGTTATGTATCTGATCGTCAGCTACCTGATAAAGCGATTGATTTAATTGATGAAGCAGCATCGAGCATT CGTATGGAAATTGACTCTAAACCTCAGCCGTTAGATCGTTTAGAGCGCCGTATCATTCAATTAAAATTGGAGCAACAAGC GCTACAAAAAGAAGATGATGATGCGAGTCGTAAACGTTTAGCAATGCTTGAAAAAGAATTAGGTGAAAAAGAACGTGAAT ATGCGGAGTTAGAAGATGTTTGGAAAGCTGAAAAAGCCGCCCTTTCAGGTACACAGCATATTAAAGCGGAGCTAGACAGT GCCAAAACACAAATGGAACAAGCGCGCCGTGCCAGTGACTTCGCAAAAATGTCGGAATTACAATACGGTGTGATCCCTGC GCTAGAAAAACAACTAGCGCAAGCAGAATCCGCTGAAGGCAAAGAAATGACCCTGCTCCGCTACCGTGTGACCGATGAGG AAATTGCCGAAGTGCTTTCGCGCGCAACTGGTATTCCTGTGGCGAAGATGATGGAAGGGGAAAAAGAAAAACTCTTACGT ATGGAAGAAGAATTGCACAAACGAGTGATTGGTCAACATGAAGCCATTGAAGCAGTATCGAATGCAATTCGCCGTAGCCG TGCTGGGTTATCCGATCCAAATCGTCCAATTGGATCGTTCTTGTTCTTAGGTCCAACCGGAGTCGGGAAAACAGAACTTT GTAAAACCCTTGCCAATTTCCTGTTTGATGACGAAAACGCGATGGTGCGTATTGATATGTCAGAATTTATGGAAAAACAC AGTGTTTCACGCTTAGTGGGCGCCCCTCCAGGTTATGTGGGTTACGAAGAAGGAGGCTATTTAACCGAAGCCGTTCGTCG TCGCCCTTATTCCGTGATCTTGCTTGATGAAGTGGAAAAAGCACACCATGATGTGTTTAACATTTTATTACAAGTGTTAG ATGATGGACGCTTAACCGATGGACAAGGGCGCACCGTGGATTTCCGCAATACTGTGGTAATCATGACATCTAACTTAGGC TCACACTTGATCCAAGAAAACAGTACATTGGATTACCCAAGTATGAAAGAGTTAGTGATGTCTGTGGTGGGACAACATTT CCGCCCAGAATTTATCAACCGTATTGATGAAACCGTCGTCTTCCACCCATTAGGTAAAGAAAACATTCGTGAGATTGCGA CAATCCAACTTGCTCGCTTAATCAAACGTATGGAAAGCCATGGTTATCAATTACACTTCACCGATGCTTGCTTAGACTTT ATTGGCGAGGTAGGTTACGATCCGGTGTATGGCGCACGTCCGTTAAAACGTGCGATTCAACAAGAAATTGAGAACCCGTT GGCACAACAAATTCTGTCAGGCAAATTATTACCGAATCAATTAGTCACCATTGACTATGTTGACGGAAAAGTGATTGCCA ATCAGTAA Protein sequence : MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPIHLLTALLNQQGGSTAPILTASGANLPLLRNELNAELSKLPQVSGSGGD VQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQAL EKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLD MGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQ YIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSI RMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDS AKTQMEQARRASDFAKMSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLR MEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIQENSTLDYPSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDF IGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTIDYVDGKVIANQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-154 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
NT08PM_2041 | YP_006240901.1 | chaperone ClpB | VFG2076 | Protein | 2e-103 | 41 |