Gene Information

Name : NT08PM_1246 (NT08PM_1246)
Accession : YP_006240123.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1312441 - 1313334 bp
Length : 894 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGATTCCGCGTTAATTGAGCTTTTTCTAAATGAAATTTGGATCGAAAAGCAACTCTCGCAAAATACGATTGCCTC
TTATCGCTTAGATTTGACTGCACTCACTCAATGGCTAGAAAAACAACAATTAACGCTTATCAATCTGGATGCTATCGACT
TACAAACATTTCTAGGTGAACGCTTAAACCAAGGCTACAAAGCCACCAGCACAGCTCGCCTACTCAGTGCGATGCGAAAA
TTATTTCAATATTTATACCGCGAAAAATACCGCACAGATGATCCCAGTGCGGTATTAAGTTCTCCCAAATTACCTAGCCG
CTTGCCTAAATACCTAACGGAACAACAAGTTACTGATTTACTGAACTCCCCTGATGTCGATATCCCCTTAGAATTACGCG
ATAAAGCCATGATGGAATTGCTTTATGCAACAGGATTACGGGTCACTGAATTAGTGTCGTTGACTATTGAAAACATAAAT
ATTAATCAGGGGATTGTACGGGTTGTTGGTAAAGGAAACAAAGAACGGATTGTTCCCATTGGGGAAGAAGCAACTTATTG
GATTCGTCAATTTATGCTATATGGGCGTCCTTTTTTATTGCATGGACAAAGCTCAGATGTCGTCTTCCCAAGTAAAAGAG
CGCTACAAATGACACGCCAAACCTTTTGGCACCGTATTAAACATTATGCGCTTTTGAGTGAGATTGATATCAATAGCTTA
TCGCCCCATGTACTGCGTCACGCTTTTGCTACACATTTAGTAAATCATGGTGCGGATTTGCGTGTAGTACAAATGTTACT
CGGACACAGCGATTTATCCACAACACAAATTTATACTCACGTTGCTAAAGAGCGTTTAAAACATTTACATGAACGCTACC
ATCCAAGGGGCTAA

Protein sequence :
MKDSALIELFLNEIWIEKQLSQNTIASYRLDLTALTQWLEKQQLTLINLDAIDLQTFLGERLNQGYKATSTARLLSAMRK
LFQYLYREKYRTDDPSAVLSSPKLPSRLPKYLTEQQVTDLLNSPDVDIPLELRDKAMMELLYATGLRVTELVSLTIENIN
INQGIVRVVGKGNKERIVPIGEEATYWIRQFMLYGRPFLLHGQSSDVVFPSKRALQMTRQTFWHRIKHYALLSEIDINSL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKHLHERYHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 48
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 48