Gene Information

Name : NT08PM_1208 (NT08PM_1208)
Accession : YP_006240087.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : FecE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1277988 - 1278761 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence :

ATGAGCTTAACCGTAGAACATTTACAACTGGCGTATCAAGATAAAACCATTGTCTCTAATCTCAATTTGCGTTTGCCGAG
TAACAAAGTCATTGCGTTAATTGGACCGAATGGCTGCGGAAAATCCACGTTATTAAAAGCGCTTGCGCGTTTGCTGAAAC
CCAAGTCAGGTCAAGTGAAACATCAAGAGCAAGATATTTGGCAGATCACGGCCAAGTCTTACGCTAAAACCTTAGCGTTT
CTACCACAACAACATTTGGTACCAGAAGGTATTAAAGTGCGTGAGTTAGTAGCTTATGGGCGTTCACCGTATTTAAATCT
TTGGGGAAAACTCAGTGAAAAAGATGAGAAGATAGTAACACAAGCAATGCAGATAACCCAGACAGACGCATTCGCAGAAC
GACTCGCTACTGATTTATCTGGAGGACAACAGCAACGCGTTTTTTTAGCGATGACATTAGCACAAGATGCCAATATTGTC
TTATTAGATGAACCCACAACTTATCTCGATCTCAACCATCAAGCTGAACTGATGTCAATGATGCGACGCCTACAGCAACA
AGGTAAAACGGTCATTACGGTCTTGCATGATCTGAACCAAGCTTGTCGCTATTGTGATTATTTAGTTGTACTTAAACAAG
GGGAATTAATTGCCCAAGGCACGCCACACGAGGTGATGACCGAACACTTATTAAAACAGGTGTTTGATCTCAATGTAGAG
ATTCATCAAGATCCTATCAGTTTCACCCCAATGTTTATTTTGAAAGCGCATTAA

Protein sequence :

MSLTVEHLQLAYQDKTIVSNLNLRLPSNKVIALIGPNGCGKSTLLKALARLLKPKSGQVKHQEQDIWQITAKSYAKTLAF
LPQQHLVPEGIKVRELVAYGRSPYLNLWGKLSEKDEKIVTQAMQITQTDAFAERLATDLSGGQQQRVFLAMTLAQDANIV
LLDEPTTYLDLNHQAELMSMMRRLQQQGKTVITVLHDLNQACRYCDYLVVLKQGELIAQGTPHEVMTEHLLKQVFDLNVE
IHQDPISFTPMFILKAH

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	8e-64	54
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	8e-46	45
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	7e-46	44
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	7e-46	44
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	43
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	43
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	43
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-47	43
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	1e-42	43
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-42	43
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	9e-43	43
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	9e-43	43
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	9e-42	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NT08PM_1208	YP_006240087.1	FecE	BAC0164	Protein	5e-64	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NT08PM_1208	YP_006240087.1	FecE	VFG1042	Protein	4e-64	54
NT08PM_1208	YP_006240087.1	FecE	VFG0925	Protein	4e-43	43