Gene Information

Name : NT08PM_1114 (NT08PM_1114)
Accession : YP_006239994.1
Strain : Pasteurella multocida 3480
Genome accession: NC_017764
Putative virulence/resistance : Virulence
Product : protein YgiX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1191825 - 1192541 bp
Length : 717 bp
Strand : -
Note : YgiX

DNA sequence : 
TTGTGTAAAATAAGAACAAGTGTTGAAAAAAGTGCGGTCAAAAAAATGCGAATTTTATTAATAGAAGATGATGCCTTAAT
TGGCAATGGCTTACAGATTGGGCTAACTAAATCGGGTTTTTTAGTCGATTGGTTTCAGGATGGCAAAACAGGATTGGAGG
CGGTAAAAAGCGCGCCTTATGATGCGGTTGTGTTAGATTTAACCTTACCTAAAATGGATGGATTAGACATCCTGCAGCGT
TGGCGTAAAGAAAAATACGATGTACCCGTATTAATTCTAACCGCGCGCGATACGCTAGATGAACGAGTAATGGGATTGCA
AAAAGGAGCTGATGATTATTTATGTAAACCTTTTGCATTAGTGGAAGTGATTGCACGTTTGCAGGCACTCATTCGTCGTC
GTTATGGGCAAGCTAGCCCAGTGATTGAACATAGCTTGGTCTGTTTTGACCCGAATCAGCGCAAAGTATTTTTAAGACAG
GAAGAGGTGGCGTTAACGACGAGAGAATATAAATTATTAGAGTTATTTATGTTGAATAAAGATCGCGTGCTTTCTCGCCG
TATGATTGAAGAGAAACTTTATAACTGGGACGATGAAGTCAGTAGTAATGCCTTGGAGGTCCATATTTATAATTTACGCC
AAAAATTAGGGAAACAATTTATTCGTACTGTGCATGGTGTAGGGTATGCGCTAGGAAAAAATGATGAAATGGCTTAA

Protein sequence : 
MCKIRTSVEKSAVKKMRILLIEDDALIGNGLQIGLTKSGFLVDWFQDGKTGLEAVKSAPYDAVVLDLTLPKMDGLDILQR
WRKEKYDVPVLILTARDTLDERVMGLQKGADDYLCKPFALVEVIARLQALIRRRYGQASPVIEHSLVCFDPNQRKVFLRQ
EEVALTTREYKLLELFMLNKDRVLSRRMIEEKLYNWDDEVSSNALEVHIYNLRQKLGKQFIRTVHGVGYALGKNDEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_1114 YP_006239994.1 protein YgiX BAC0487 Protein 6e-42 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT08PM_1114 YP_006239994.1 protein YgiX VFG0473 Protein 3e-41 44
NT08PM_1114 YP_006239994.1 protein YgiX VFG1390 Protein 3e-30 42