|
Name : ureC (SAEMRSA15_21870) Accession : YP_006238514.1 Strain : Staphylococcus aureus HO 5096 0412 Genome accession: NC_017763 Putative virulence/resistance : Virulence Product : urease alpha subunit (pseudogene) Function : - COG functional category : - COG ID : - EC number : - Position : 2362234 - 2363948 bp Length : 1715 bp Strand : + Note : - DNA sequence : ATGAGCTTTAAAATGACGCAAAATCAATATACGAGCTTATACGGTCCTACTGTTGGAGATTCTATTCGTTAGGTGATACG AACCTATTTGCTCAAATAGAAAAAGACTATGCAGTTTATGGTGAAGAAGCTACCTTTGGCGGTGGAAAATCTATTAGAGA CGGTATGGCGCAAAATCCTCGTGTAACACGTGATGACGTGAACGTTGCAGACCTTGTTATTTCTAATGCCGTTATTATCG ATTACGATAAAGTGGTTAAAGCCGATATAGGTATTAAAAATGGTTATATTTTCGCCATTGGAAATGCCGGCAACCCGGAT ATAATGGATAATGTCGACATTATTATAGGATCAACAACAGATATCATTGCCGCTGAAGGTAAAATCGTCACTGCTGGTGG TATTGATACTCATGTTCATTTTATTAATCCTGAACAAGCAGAGGTCGCATTAGAAAGTGGTATTACGACTCATATTGGTG GTGGTACTGGTGCTTCAGAAGGTTCTAAAGCAACAACTGTAACTCCAGGTCCATGGCATATTCATAGAATGTTAGAAGCT GCCGAAGGTTTACCGATTAATGTCGGTTTTACAGGTAAAGGACAAGCAACAAATCCAACTGCACTCATTGAACAAATCAA TGCCGGAGCAATTGGATTAAAAGTACATGAAGACTGGGGTGCAACACCATCTGCTTTGAGTCATGCATTAGATGTTGCTG ATGAATTTGATATTCAAATTGCATTACATGCAGATACTTTAAATGAAGCAGGATTTATGGAAGACACAATGGCTGCTGTT AAAGACCGTGTACTTCATATGTACCATACTGAAGGTGCTGGTGGCGGTCATGCGCCTGATTTAATTAAATCCGCTGCATT TTCAAATATTTTACCTTCATCTACAAATCCAACATTGCCATATACACATAATACTGTAGATGAACATTTAGATATGGTAA TGATTACTCACCATTTAAATGCGGCTATTCCTGAAGATATCGCATTCGCAGATTCACGTATTCGTAAAGAAACGATTGCA GCAGAAGATGTCCTGCAAGATATGGGTGTATTCAGTATGATTAGTTCCGATTCACAGGCAATGGGCCGTGTAGGTGAAGT AATTACACGAACATGGCAAGTAGCACATCGCATGAAAGAACAACGTGGTCCTTTAGATGGTGATTTTGAACATAATGATA ATAATCGCATCAAACGTTATATCGCTAAATATACAATTAACCCAGCAATTACACATGGTATTTCTGAATATGTAGGATCT ATCGAGCCGGGCAAACTAGCTGACATTGTCTTATGGGATCCCATTTTCTTTGGTGTTAAACCTGAATTAGTTGTAAAGGG CGGATTAATTAACTCTGCCGTAAATGGCGATGCAAATGGTTCTATCCCTACATCTGAACCAATGAAGTACCGTAAAATGT ATGGTCAATACGGCGGAAACCTTACAAGTACGTCAATGACATTCGTGTCTAAAACTGCTTATGAAAATGGTATCAATCGT GCATTAAATTTAAAACGCATGGTGCGTCCAGTTAAAAATATTAGACAATTATCTAAAGCAGATATGAAAAATAACAGCGC AACACCTAAATTAGACGTTGATCCACAAACATATGAAGTATATGTAGATGGAGAAAAAATTACAAGTAATGCAGCAACTG AGTTACCATTAACTCAAAGATACTTCTTATTCTAG Protein sequence : MSFKMTQNQYTSLYGPTVGDSIRLGDTNLFAQIEKDYAVYGEEATFGGGKSIRDGMAQNPRVTRDDVNVADLVISNAVII DYDKVVKADIGIKNGYIFAIGNAGNPDIMDNVDIIIGSTTDIIAAEGKIVTAGGIDTHVHFINPEQAEVALESGITTHIG GGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAIGLKVHEDWGATPSALSHALDVA DEFDIQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMV MITHHLNAAIPEDIAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPLDGDFEHND NNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPELVVKGGLINSAVNGDANGSIPTSEPMKYRKM YGQYGGNLTSTSMTFVSKTAYENGINRALNLKRMVRPVKNIRQLSKADMKNNSATPKLDVDPQTYEVYVDGEKITSNAAT ELPLTQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-176 | 63 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-178 | 63 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 3e-178 | 63 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-178 | 63 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 3e-173 | 63 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 3e-173 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_006238514.1 | urease alpha subunit (pseudogene) | VFG0270 | Protein | 8e-158 | 57 |
