Gene Information

Name : capB (SAEMRSA15_01160)
Accession : YP_006236490.1
Strain : Staphylococcus aureus HO 5096 0412
Genome accession: NC_017763
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 143037 - 143723 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTGTATGAAAAACCAAAATCAACAATTAGTGAAAAGTTTCGGGG
TATACGTTCAAACATCATGTTTTCAAAAGCAAATGGCGAAGTAAAGCGCTTATTAGTTACTTCTGAAAAACCTGGTGCAG
GTAAAAGTACAGTCGTATCCAATGTAGCGATTACGTATGCACAAGCAGGTTATAAAACGTTAATTATCGATGGGGATATG
CGTAAGCCAACACAAAACTATATTTTTAATGAACAAAATAATAATGGATTATCGAATTTAATCATTGGTAGAACGACTAT
GTCAGAAGCTATTACGACGACAGAAATTGATAATTTAGATTTACTAACAGCTGGTCCTGTACCTCCTAATCCAACAGAAT
TAATTGGTTCTGAAAGATTTAAAGAGTTAGTTGATCTTTTCAATAAACGTTACGACATTATTATTGTCGATACACCGCCA
GTTAATACCGTGACTGATGCACAACTATATGCGCGTGCTATTAAAGATAGTCTGTTAGTCATTGATAGTGAAAAAAATGA
TAAAAATGAAGTTAAAAAAGCTAAAATACTTATGGAAAAAGCAGGCAGTAACATTCTGGGCGTCATTTTAAATAAGGCAA
AAGTAGATAAATCTTCTAGTTATTATCACTATTATGGAGATGAATAA

Protein sequence : 
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLIIDGDM
RKPTQNYIFNEQNNNGLSNLIIGRTTMSEAITTTEIDNLDLLTAGPVPPNPTELIGSERFKELVDLFNKRYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKILMEKAGSNILGVILNKAKVDKSSSYYHYYGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-72 64
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-62 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_006236490.1 capsular polysaccharide synthesis enzyme VFG1298 Protein 4e-101 97