Gene Information

Name : hla (SAEMRSA15_09940)
Accession : YP_006237352.1
Strain : Staphylococcus aureus HO 5096 0412
Genome accession: NC_017763
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1109686 - 1110645 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCCATATTAATGAATCCTGTCGCTAATGCCGC
AGATTCTGATATTAATATTAAAACCGGTACTACAGATATAGGAAGCAATACTATAGTAAAAACAGGTGATTTAGTCACTT
ATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAAATATTAGTC
ATCAGAACGAAAGGTACCATTGCTGGTCAGTATAGAGTTTATAGCGAAGAAGGCGCTAATAAAAGTGGTTTAGCCTGGCC
TTCAGCCTTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCACAAATTTCTGATTACTATCCTAGAAATTCAATTG
ATACTAAAGAATATATGAGTACATTAACTTATGGATTCAACGGTAATGTGACTGGTGATGATTCTGGAAAAATTGGCGGT
TTGATTGGTGCAAATGTTTCAATTGGTCATACACTCAAATATGTTCAACCAGATTTCAAAACAATTTTAGAAAGTCCAAC
TGATAAAAAAGTAGGTTGGAAAGTTATATTTAACAATATGGTGAATCAAAATTGGGGACCATACGACAGAGATTCTTGGA
ACCCAGTATACGGCAATCAACTTTTCATGAAAACAAGAAACGGTTCAATGAAAGCAGCAGATAACTTCCTTGATCCTAAC
AAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGGAAAGCAACCAAACA
ACAATCAAATATAGATGTAATATACGAACGAGTTCGTGATGACTATCAATTACATTGGACTTCAACAAATTGGAAAGGTA
CTAATACTAAAGATAAATGGACGGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence :
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTIVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKILV
IRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDSGKIGG
LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPN
KASSLLSSGFSPDFATVITMDRKATKQQSNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-143 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-144 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-144 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-143 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 6e-144 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hla YP_006237352.1 alpha-hemolysin VFG1293 Protein 2e-144 99