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Name : HCN_0854 (HCN_0854) Accession : YP_006235219.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 861043 - 862299 bp Length : 1257 bp Strand : - Note : polysaccharide biosynthesis protein DNA sequence : ATGCCTATTCCCACGCTTCAAAATGCACATATCGCTATCATCGGCTTAGGCTATGTTGGTTTGCCCTTGTCTGTGGCTTT TAGCAAAATCTATCCCACCATTGGCTTTGATATAAATCCACAGCGGATTGATGAGCTAAAATCTAGCTTTGATAGCACAC AGCAAGTAAGCAAACAAGAGCTGCAAAACTCCCCAAATCTTAGCTTCACGCATAATCTCTCACACATCGCACACGCAAAT ATTTATATTATCTGTGTGCCTACACCCATCACAGAAAACAAAACACCAGATCTCTCCGCCCTAATTCACGCAAGTGAGCT TGTAGGTAAGATTTTACAAAAAGGTAATATCGTGATTTATGAATCTACCACTTACCCCACCTGCACGGAAAATGAATGCA AAAACGCCTTAGAAAAAAGCTCAAATCTCACTTTCAACACTGACTTTCACCTTGGCTACTCGCCTGAACGCATTAACCCA AGCGATAGCTCCCACACACTCACACAGATTCAAAAAATCACTTCCGGTAGCACAAAGCAAGTAGCACACTTCATTGATAG CCTATATAGCTCAATCATCACAGCCGGGACTTTTTGCGTCTCATCAATCAAAACTGCTGAAATGACAAAAATCATAGAAA ACGCTCAACGCGATTTAAACATCGCCTTTATCAATGAAATGTATATGATTTGCGATGCCTTGCAGATTGACGCCCTAGAA GTGCTTGAAGCGGCAAAGACAAAGTGGAACTTCCTGCCTTTCACACCCGGGCTTGTTGGGGGGCATTGCATAAGTGTAGA TCCTTATTATCTCACGCATAAGCTTCATAGTATCGGCTATCACCCGCAAGTGATTAGCTCTGGGCGGCTCATTAATGATA CTATGCCACATTTTATCGCACAGAAAATCATCAAGCTACTTATTCAAAATGGCATTGAGATTCTAAACGCAAAAGTTTTA ATCCTTGGCATTACCTTTAAGCAAAACTGCCCTGATATACGAAACTCCAAAGTCCCCATTGTGAAAAAGGAGCTAGAATC TTTTGGGCTAAAAGTAGATGTGTATGACCCTGTGGCAAATAAGCAAGAAGTGCAAAAAGAGTATCAAATCTCACTTTTAG ATGAGTTGCCCTTAGCCTATTTTGACTGCATTTTTCTAGCCGTAGCTCATAATAAGCTCCTCTGCCTTAATCACAAAAAG CTAGGCAAAGCAAAATCTATCTATTACACGCTCACAGCCCATAAGCTAGATTCATAA Protein sequence : MPIPTLQNAHIAIIGLGYVGLPLSVAFSKIYPTIGFDINPQRIDELKSSFDSTQQVSKQELQNSPNLSFTHNLSHIAHAN IYIICVPTPITENKTPDLSALIHASELVGKILQKGNIVIYESTTYPTCTENECKNALEKSSNLTFNTDFHLGYSPERINP SDSSHTLTQIQKITSGSTKQVAHFIDSLYSSIITAGTFCVSSIKTAEMTKIIENAQRDLNIAFINEMYMICDALQIDALE VLEAAKTKWNFLPFTPGLVGGHCISVDPYYLTHKLHSIGYHPQVISSGRLINDTMPHFIAQKIIKLLIQNGIEILNAKVL ILGITFKQNCPDIRNSKVPIVKKELESFGLKVDVYDPVANKQEVQKEYQISLLDELPLAYFDCIFLAVAHNKLLCLNHKK LGKAKSIYYTLTAHKLDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-100 | 54 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-100 | 54 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-90 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HCN_0854 | YP_006235219.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 3e-100 | 54 |
