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Name : tktA (HCN_0812) Accession : YP_006235179.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 818234 - 820189 bp Length : 1956 bp Strand : + Note : - DNA sequence : ATGCAAAGACAAGTTGTCATCACACAAGAAGATGTCCCATTACTGCAAAAGATGTCCCACACGCTAGGTTTTTTATGTGC GGATATGGTGCAAAAGGCAAATAGTGGGCATCCGGGCGCACCTATGGGACTAGCTGATATAGCAAGTGTGCTTAGCTTCC ATCTTAATCTTTCGCCTAAAAATCCTGCGTGGCTTAATCGCGATAGGCTTATTTTTAGTGGCGGACACGCAAGTGCATTA GTATATTCGTTGCTGCATTTATGGGGCTTTGATGTGAGTATGCAGGATTTACAATCTTTCCGTCAGTTTGGGTCAAAAAC GCCCGGACACCCAGAGTTTAAGCACACGCAAGGTGTAGAGATAACCACAGGTCCATTAGGGCAGGGCATAGCAAACGCTG TGGGTAAGGCAATGGCGAGTAAATATGCGACTAATCTTTTTGGACGCGAGATTTTCTCACATTTTGTGTATTGTTTATGC GGTGATGGGGATTTGCAGGAGGGTATTAGCTATGAATCTGCTTCACTAGCCGGACATCATAAGCTTTCAAATCTCATTGT GATTTATGATAGTAACAATATTACGATTGAAGGAGACACGCATATTGCGATGAGTGAGAATATAAGAGGGCGGTTTGAAG CACAGGGCTGGGAAGTGTTAGAGTGCGATGGGCATAATTTTTTGCAGATTCATAACACTTTAGAATCTGCAAAAAGCTCT TCAAAACCAAGCTTAATTATCGCTAAAACGATTATTGCCAAAAATGCTCTAAGTTTAGAGGGTAGCCATAAAGCTCACGG TGCACCTTTGGGCGAAGAGATCATAGCAAAAGCAAAGCAAAAGCTAGGATTCCCTTTAGAATCTTTTCATATTCCTTGCG ATGTGGCTTTTGCTTTTGGAATGATGAAAGAGCGCGGGGAGCTTTTAGAATTACAATGGCAAAAGCAGGTGGATAATCTC CCGCAAATTGCTAGAGAGCGATTTGAAGCTATGGTAAAAATGGATATATCAAATATTTCTTATCCGCAATTTGAAGTGGG GCAGAGTGTGGCTACTCGCGTGAGTAATGGCAAGATTCTTAATGCTATTTCTGCTGGGGTGGAGGGCTTTATTGGGGGGA GTGCTGATTTAGCCCCATCAAATAACACAACGCTTGAAAATGAAGGCGATTTTCCACAGGGTAAAAATTGGCATTTTGGT ATTAGAGAACACGCTATGGGGGCGATTTGCAATGGTGTAGCAAACTATGGCTTATTTTTGCCATTTTGTGCTACTTTTTT TGTATTTAGCGACTATATGAGCCCAAGTGTGCGTGTGGCAAGCCTTATGAAAGCAAGGGTGTATTACATTTGGACACACG ATTCTATCGGTGTGGGCGAAGATGGAGCGACACATCAACCCATAGAGCAGTTAAGTCATTTTAGAGCAATGCCAAATCTG CTTGTATTCCGCCCAGCTGACGCGAATGAAAATGTGGCGTGTTGGCAAGTGGCATTAGATTCTAATCTGCCTTGTGCCTT TGTGCTAAGTCGGCAGAATCTCCCTGTGCTTATGCCTTATAATGCGGATTTGAAAGAAAAAGTGAAAAAGGGGGCATATA TTTTACAAGAGTGTGAAAATGCGGATATTACGCTTATGGCAAGTGGGAGTGAAGTGAGTTTGGCCATCAATGCAGGTAAA GCGTTAGAACAAGCAGGAATCAAAGCAAGGGTAGTGAGTGTGCCTTGCTTTGATTTATTGCTAGAGCAGTCAAAAAGCTA TGTGAAAGAGCTATGTGGGGAGAGTAAGATTCTAGCCATTGAAGCTTCAAGGGGGCTAGAGTGGTATTATGTAGCAGATG AAGTGATAAGTATGAAAGGCTTTGGGGCTTCAGGCAAGGGGGAAATGCTTTTGAATCATTTTGGATTCAGTGTAGAAAAT ATTCTTAAAGTTGCTGAAACGCTGTGTAAAAAATAA Protein sequence : MQRQVVITQEDVPLLQKMSHTLGFLCADMVQKANSGHPGAPMGLADIASVLSFHLNLSPKNPAWLNRDRLIFSGGHASAL VYSLLHLWGFDVSMQDLQSFRQFGSKTPGHPEFKHTQGVEITTGPLGQGIANAVGKAMASKYATNLFGREIFSHFVYCLC GDGDLQEGISYESASLAGHHKLSNLIVIYDSNNITIEGDTHIAMSENIRGRFEAQGWEVLECDGHNFLQIHNTLESAKSS SKPSLIIAKTIIAKNALSLEGSHKAHGAPLGEEIIAKAKQKLGFPLESFHIPCDVAFAFGMMKERGELLELQWQKQVDNL PQIARERFEAMVKMDISNISYPQFEVGQSVATRVSNGKILNAISAGVEGFIGGSADLAPSNNTTLENEGDFPQGKNWHFG IREHAMGAICNGVANYGLFLPFCATFFVFSDYMSPSVRVASLMKARVYYIWTHDSIGVGEDGATHQPIEQLSHFRAMPNL LVFRPADANENVACWQVALDSNLPCAFVLSRQNLPVLMPYNADLKEKVKKGAYILQECENADITLMASGSEVSLAINAGK ALEQAGIKARVVSVPCFDLLLEQSKSYVKELCGESKILAIEASRGLEWYYVADEVISMKGFGASGKGEMLLNHFGFSVEN ILKVAETLCKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 5e-103 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-99 | 42 |
