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Name : smpB (HCN_0785) Accession : YP_006235155.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 789307 - 789774 bp Length : 468 bp Strand : + Note : tmRNA-binding protein SmpB DNA sequence : ATGCAGGAAAAAATCATTGCCAAGAATAAAAAGGCGTTTTTTGATTATGAGATTTTGCAGACTTTAGAATCTGGCATTGC TTTGCTTGGTAGCGAGGTGAAAAGTATCCGTGCTGGGCGGGTTAATCTCAAAGATAGCTTTGTGAGAATCGTGCGTGGGG AGGCGTTTTTGTTTAACGCACATATTTCATTTTTGGAAACGACTTTTACGCATTTTAAGCCAAATGAGCGGCGAGAAAGG AAGCTCTTGCTTCATAGAAGTGAGATTGATAAGCTTTTTGGCAGTGTGAGTAAGGAAGGGCTATCCATCGTGCCTTTAAG TATGTATTTAAACAAAAGAAATAGAATCAAGCTGTCAATCGCCCTTGTGCGTGGGAAAAAGCTCTATGATAAGCGTGAGA GTATAAAGAAAAAAACGCTTGAAAGAGAGGCTAGGGCAAATATGAAAGACTATGGGAAAAAGATTTAG Protein sequence : MQEKIIAKNKKAFFDYEILQTLESGIALLGSEVKSIRAGRVNLKDSFVRIVRGEAFLFNAHISFLETTFTHFKPNERRER KLLLHRSEIDKLFGSVSKEGLSIVPLSMYLNKRNRIKLSIALVRGKKLYDKRESIKKKTLEREARANMKDYGKKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-23 | 46 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-24 | 45 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-23 | 44 |
