Gene Information

Name : HCN_0553 (HCN_0553)
Accession : YP_006234950.1
Strain : Helicobacter cinaedi PAGU611
Genome accession: NC_017761
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 574962 - 575969 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGGGATTTGTGAAAAAAGTGCTTATATGTATGGCGATGTGTGTGGGGTGTGTATATGCCCTAGATCCACAGCTTGTAGC
ATTAGTCAATGAATATAAAAAAAATGGCATAGGCAGTATAGAATCTAAGCTTGAAGGGTATTTGACAAGCAAAGAATATT
GGGCAGAGTATCTTAAAGGAAACGCGACAGAATATGGGTATTTTGAGGATTTGAAATTTTTATTTGTATCAAACAAATCT
GCTCCATCACTGCATTTGTATCAATTTAAAGATTCTGTATTGCACGAGCTTGGCAGCTCTTCAGCTCTTGTGGCAAAAGG
TAAGGGCAATAAGAAAAAAGAGGGTGATTTGACAACGCCCATTGGTTCGTATGATTTAAATGCACGATTAACCGGGCTTG
ATCAATACTATGGACCTTTGGCATTTTCTACAAGCTACCCAAATGTGTATGATCAATCACTCAAAAAAACAGGCGGCGGA
ATCTGGATTCACGGATTACCTTTAAATGGCAATAGGGAAGAGCTGAATACGCGGGGCTGTATTGCCATTGACAATGAGTT
GTTGAAAAAGTATGATAGGCTCATTGATTGGAAAAAAACAATGCTTATCACTTATGAGGGGGAGTTAAAACCTGCTGATG
TTGATGAACTCGCCCTTGTGCTTTCAAGCTTGTATCAGTGGAAAAATGCGTGGCAAAAAAGTGATTTGACAAGCTATCTT
GCCTTTTATGATGAAAAGGACTTCTATCGCCCCGATGGTATGAGTTTTAAATCTTTTAGGGAGCATAAGAAAAATATTTT
TGCTAAAAATGAAGATAAGGTGATTAGAATCTCACTTGTAAATGTCTCAATCTATCCAAATGAAGCCCATAGAAATATGT
ATCGCATTAGCTTTATGCAGGATTACAAAGCCACACTTAAAGGTAAGCCAAGCTTTAGCTCTGTGGGCAAGAAAGATATG
TATGTTGTGGTGGAGAATGGTAAAATGAAGATTCTAAGTGAAAGGTAG

Protein sequence :
MGFVKKVLICMAMCVGCVYALDPQLVALVNEYKKNGIGSIESKLEGYLTSKEYWAEYLKGNATEYGYFEDLKFLFVSNKS
APSLHLYQFKDSVLHELGSSSALVAKGKGNKKKEGDLTTPIGSYDLNARLTGLDQYYGPLAFSTSYPNVYDQSLKKTGGG
IWIHGLPLNGNREELNTRGCIAIDNELLKKYDRLIDWKKTMLITYEGELKPADVDELALVLSSLYQWKNAWQKSDLTSYL
AFYDEKDFYRPDGMSFKSFREHKKNIFAKNEDKVIRISLVNVSIYPNEAHRNMYRISFMQDYKATLKGKPSFSSVGKKDM
YVVVENGKMKILSER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_734 YP_003728755.1 hypothetical protein Not tested cag PAI Protein 8e-77 47