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Name : katA (HCN_0210) Accession : YP_006234644.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 228813 - 230258 bp Length : 1446 bp Strand : + Note : - DNA sequence : ATGGCAAATTTCAAGTCATTAACCACAACCACAGGACGCCAAGTTGGTGATAACCAAAATGTAATGAGCGTAGGACCACG CGGACCGCTACTTTTGCAAGATACTTGGTATTTAGAGAAACTAGCGGCATTTGATAGAGAGAGAATCCCCGAGCGCGTAG TGCATGCACGCGGAAGTGGCGCACACGGCGTATTTGAAGCTACTGCTGATATTAGCAAATATTCAAAAGCAGCGGTATTT AAAAAAGGCACAAAAACGCCTATGTTTATTCGTTTTTCAACCGTTGCCCCAGAGTTAGGCTCAGCTGATGCGGTGCGCGA CCCTAGAGGTTTTGCGGTTAAATTTTATACAACAGAGGGAAATTGGGATTTAGTTGGCAATAATACGCCTATTTTCTTTA TCCGCGACCCATATAAATTCCCTGATTTTATCCACAGCCAAAAGCGCGACCCAAAAACACATATCCAAAACCCTGAAAGG TGGTGGGATTTTTGGTGTCAAACCCCAGAGGCATTGCACCAAATCACCTATCTTATGGGCGATAGAGGCATACCTGCAAG CTACCGCAATATGAATGGCTACGGAAGCCACACTTTTAGTCTTATCAATGACAAAAATCAGCGATTTTGGGTGAAATTTC ATTTTCACACAATGCAAGGGATAAAAAACCTCACAAATGAAGAGGCGGCAGCGATTCGTGCGGTAGATATGGATTCTCAT CAACGCGATTTGTTTGAGTCAATCGAAAAGGGCGATTATCCCAAATGGAGAGTTTCAATCCAAGTAATGCCCGAATCAGA AGCAAAGACTTATCGATTCCACCCATTTGATGTAACAAAGACTTGGAGTCATAAGGATTATCCGCTTATTGAGATTGGTA TTATGACACTTAATAAAAACCCAGAAAATTACTTTGCCGAAGTTGAACAAGCCGCGTTTAATCCCGCTAGTGTGGTGCCA GGCATTGGGTATAGTCCAGATAGATTGCTTCAAGGCAGACTCTTTGCTTATGGGGATACACAACGCTACCGACTAGGCAT TAACCACCATCAGATTCCGATAAATGCACCAAAATCCGCGCTTAATTCTAGTGTGCGCGATGGCTATATGACAAATGGCG CGTATGGCAGCATTCGCAATTATGAACCTAGTATTTTGGACGGATATAAGGATAATTGGAGTTTAAAAGAGCCGATTTTA GACCCGCTAAACTTTGAGAGTGAAAGCAAACTCGGGCAGTGGGATTATAGAGAAGATGACGATGATTACTACACACAAGC GGGTGATTTGTATCGGCTAATGAGTAGCGATGAGAAAGAGCGGCTTTGTCAAACGATTGCAGGCACGATGAAAGGCATAA ATGAAAAAATCATTAAGTTGCAATTAGAGCATTTTAATAAGGCTGATAGCAACTATGCAGCAAGAATAGCCCAGCTTCTA AAATAA Protein sequence : MANFKSLTTTTGRQVGDNQNVMSVGPRGPLLLQDTWYLEKLAAFDRERIPERVVHARGSGAHGVFEATADISKYSKAAVF KKGTKTPMFIRFSTVAPELGSADAVRDPRGFAVKFYTTEGNWDLVGNNTPIFFIRDPYKFPDFIHSQKRDPKTHIQNPER WWDFWCQTPEALHQITYLMGDRGIPASYRNMNGYGSHTFSLINDKNQRFWVKFHFHTMQGIKNLTNEEAAAIRAVDMDSH QRDLFESIEKGDYPKWRVSIQVMPESEAKTYRFHPFDVTKTWSHKDYPLIEIGIMTLNKNPENYFAEVEQAAFNPASVVP GIGYSPDRLLQGRLFAYGDTQRYRLGINHHQIPINAPKSALNSSVRDGYMTNGAYGSIRNYEPSILDGYKDNWSLKEPIL DPLNFESESKLGQWDYREDDDDYYTQAGDLYRLMSSDEKERLCQTIAGTMKGINEKIIKLQLEHFNKADSNYAARIAQLL K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-130 | 56 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 7e-94 | 46 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-91 | 45 |
