Name : fliP (HCN_0157) Accession : YP_006234595.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 174827 - 175651 bp Length : 825 bp Strand : + Note : - DNA sequence : TTGAAAAAACTCATAGCTATGCTTTTGCTTTGTATTTACTCCCTTGCTTACGCAAATCCACAAAGCCCAGATTCTCCAAA CGCTAATCTCACTCCAGCACTTCCAGCCCCATCAAATATCGCTCCGCTTCCTTCGCTGCCTAAAAATCCAGTGTTGCCCT CCGTGGATTTATCGCTGACTGCACCACAAGAGCCAACCGAGCTAGTTGCAACGCTCAATATCGTCCTTATCATCACACTG CTTGTGATTGCCCCTTCACTTGTGCTTGTGATGACTAGCTTTACACGCATTGTCATTGTCTTTGCTTTTTTACGCACTGC TTTAGGTACACAGCAGTCCCCACCAACACAGGTTTTAGTCAGCCTTGCACTTGTTTTGACATTTTTCATTATGGAGCCAG TAGCGACTAAAAGCTATGAAGTTGGCATAAAGCCTTATACAGAAAAGCAGATTTCTTATGATGAGGCGTTTGAACGGGCA ATTGTGCCTTTTAAGGATTTTATGATTAAAAACACGCGTGAAAAGGATTTGGCACTCTTTTTTAGAATCCGCAACCTTGA AAATCCCCAAACCGTTGATGATGTGCCACTGACTGTGCTTATCCCGGCATTTATGATAAGTGAGCTTAAGACGGCATTTT GGATTGGATTCTTATTGTATCTGCCCTTTTTAGTCATTGATATGGTGATAAGCTCCGTGCTTATGGCAATGGGTATGATG ATGTTGCCGCCGGTTATGATTTCACTGCCTTTTAAGATTCTAGTCTTTGTGCTGGTTGATGGGTGGAATCTGCTTATTGG GAATCTTGTGCAGGGCTTTAAGTAG Protein sequence : MKKLIAMLLLCIYSLAYANPQSPDSPNANLTPALPAPSNIAPLPSLPKNPVLPSVDLSLTAPQEPTELVATLNIVLIITL LVIAPSLVLVMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALVLTFFIMEPVATKSYEVGIKPYTEKQISYDEAFERA IVPFKDFMIKNTREKDLALFFRIRNLENPQTVDDVPLTVLIPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMM MLPPVMISLPFKILVFVLVDGWNLLIGNLVQGFK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-27 | 44 |
ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-27 | 44 |
ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-27 | 44 |
yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-27 | 43 |
yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-27 | 43 |
YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 2e-26 | 43 |
hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-30 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliP | YP_006234595.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 1e-27 | 44 |
fliP | YP_006234595.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 1e-27 | 42 |