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Name : HCN_1425 (HCN_1425) Accession : YP_006235738.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Virulence Product : type VI secretion protein EvpB/VC_A0108 family Function : - COG functional category : - COG ID : - EC number : - Position : 1419786 - 1421240 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGTCAAGCGATAAAGTGGTTGATACACCTATTATTGAAAGCATTATGGAAAAAAGTAAGTATTTAAAAAATGATGAAAG TTATAGTATAGCTAAAAGAGGTGTTGCCGAATTTATCTCTGCTATTGTTGAGAATGATGATGTAGAAGATAAAATTAATA AATTTGCTTTAGATGAGATGATAGCACATATTGATGATTTAGTATCTAAGCAAATGGACGAGATTCTACACAATGAGGAT TTCCAAAAACTAGAGTCTGTATGGAGAGGCTTATATTTCTTAGTAGAAAGAACAGATTTTAATGAAAATATTAAAATCAA CCTTTTTGATGTAACCAAAGAAGAAGCTTTAGAAGATTTTGAGAACAATCCTGATATTACCCAAAGTGTCATTTATAAAA ATATTTATTCTTCAGAATATGGACAATTTGGTGGAGAGCCTGTTGGTGCTATCATAGGCGATTATCAGCTTAGCACCAAT AGTCCAGATATGACTTTTTTAAATAAAATGGCAAGTATTGCTGCAATGAGCCATTCGCCATTTTTAACCTCTTGTGCTCC TAGTTTTTTTGGGTTAGAGAATTATTCAGAGTTAGCAAATATTCAAGATTTAGGAGGTTTGCTTCAAGGTCCTCAATACA CTAGATGGAGAACCTTTAGAGAAAATGAAGATTCAAAATATGTGGGGCTTATGGTAACAAGATTTTTAACACGCTCTCCT TATAGTCCAGAAGAAAATCCTATCAAAACTTTTAATTATAAAGAAAATGTTCATAATTCACATAATCATTTATTATGGGG CAATTCAGCTTATGCCTTTGCTACAAGATTAACTGAAAGTTTTGCAAAATATAGATGGTGTGGAAGTATTATAGGTCCAA AAAGTGGAGGGAGCGTGAAAGATTTACCTACTTATCTTTACGAGAGTTTTGGCACTATGCAATCCAAGATTCCAACCGAA GTGCTTATTACAGATAGAAGAGAATATGAGCTTGCTGAAGCAGGGTTTATTGCTTTGACTTTAAGAAGAGATAGTAATAA TGCAGCTTTTTTCTCTGCAAATTCAGCTTTAAAACCTAAAGTATTTCCAAATACACCTGAGGGAAAGGAAGCAGAAACGA ATTATCGATTGGGAACACAGCTTCCTTATATATTCCTTATATCAAGATTAGCACATTATCTTAAGGTTTTACAAAGAGAA GAAATAGGTAGTTGGAAAGAAAGAACTGATATTGAAAACGGACTCAACGAATGGGTAAGACAATATATTTCAGACCAAGA AAATCCTCCTGCTGAAGTCCGAAGTAGGAGACCATTTAGAGGAGCTCAGATCAAAGTGGATAATGTGGCTGGAGAGCCGG GATGGTATAAGATAGGGCTTAGTGTTCGCCCTCATTTTAAATATATGGGCGGAAATTTCGAACTTTCATTAGTGGGCAAA CTTGATAAAGAGTGA Protein sequence : MSSDKVVDTPIIESIMEKSKYLKNDESYSIAKRGVAEFISAIVENDDVEDKINKFALDEMIAHIDDLVSKQMDEILHNED FQKLESVWRGLYFLVERTDFNENIKINLFDVTKEEALEDFENNPDITQSVIYKNIYSSEYGQFGGEPVGAIIGDYQLSTN SPDMTFLNKMASIAAMSHSPFLTSCAPSFFGLENYSELANIQDLGGLLQGPQYTRWRTFRENEDSKYVGLMVTRFLTRSP YSPEENPIKTFNYKENVHNSHNHLLWGNSAYAFATRLTESFAKYRWCGSIIGPKSGGSVKDLPTYLYESFGTMQSKIPTE VLITDRREYELAEAGFIALTLRRDSNNAAFFSANSALKPKVFPNTPEGKEAETNYRLGTQLPYIFLISRLAHYLKVLQRE EIGSWKERTDIENGLNEWVRQYISDQENPPAEVRSRRPFRGAQIKVDNVAGEPGWYKIGLSVRPHFKYMGGNFELSLVGK LDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 0.0 | 79 |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-151 | 60 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-151 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HCN_1425 | YP_006235738.1 | type VI secretion protein EvpB/VC_A0108 family | VFG2093 | Protein | 2e-155 | 60 |
| HCN_1425 | YP_006235738.1 | type VI secretion protein EvpB/VC_A0108 family | VFG2475 | Protein | 4e-147 | 54 |
