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Name : HCN_1362 (HCN_1362) Accession : YP_006638948.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Unknown Product : secreted protein Hcp Function : - COG functional category : - COG ID : - EC number : - Position : 1367652 - 1368167 bp Length : 516 bp Strand : + Note : hemolysin-coregulated protein Hcp/Type VI secreted cytotoxin system component DNA sequence : ATGGCACAACCAGCCTATATAAAAATTGAGGGTTCTACTCAAGGACTTATTTCAAGTGGAGCTTCCACAGAAGCGAGTAT TGGAAATCGTTACCAAGCAGGACACGAAGACGAGATTATGGCACAAGAAGTTGCTCATATTGTAACCGTTCCAACAGACC CACAAAGCGGACAACCATCAGGGCAAAGAGTGCATAAGCCTTTTTCTTTTACCTGTTCTTTAAATAAAGCTGTTCCTCTG CTTTATAATGCACTCACAAGCGGGGAGAGATTAACAAGTGTAGAAATTCATTGGTTTAGAACTTCTACAAGTGGGGGACA AGAGCATTATTTCACAACAAAATTAGAAGACGCTATTATTACAGATATTAATCTTGTAATGCCTAATGCACAAGAACAAA ACAATAGCGATAAAACAGAGCTTTTTAAAGTTTCTCTCAATTATAGAAAAGTGATTTGGGAGCACATTGCCGCAGGGACA AGTGGAAGTGATGATTGGAGAGAAACTAAAGTTTAA Protein sequence : MAQPAYIKIEGSTQGLISSGASTEASIGNRYQAGHEDEIMAQEVAHIVTVPTDPQSGQPSGQRVHKPFSFTCSLNKAVPL LYNALTSGERLTSVEIHWFRTSTSGGQEHYFTTKLEDAIITDINLVMPNAQEQNNSDKTELFKVSLNYRKVIWEHIAAGT SGSDDWRETKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HH0243 | NP_859774.1 | hypothetical protein | Not tested | HHGI1 | Protein | 2e-69 | 84 |
| aec16 | YP_851428.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-49 | 65 |
| aec16 | AAQ96710.1 | Aec16 | Not tested | AGI-1 | Protein | 2e-49 | 65 |
