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Name : HCN_1173 (HCN_1173) Accession : YP_006235499.1 Strain : Helicobacter cinaedi PAGU611 Genome accession: NC_017761 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : - COG ID : - EC number : - Position : 1193680 - 1194831 bp Length : 1152 bp Strand : + Note : cystathionine beta-lyase DNA sequence : ATGCAAAGCACACTTGATACCACACTAATCCACGGCGGGCTTACCACAGACCCACGCACAGGAGCGGTAAATACGCCTAT TTTCCAAACCTCCACTTACGCTCAAGATGAGCTAGGCAAACACAAAGGCTATGAATACTCTCGCACCAAAAACCCCACAA GAGATGGGATTGAAAGCCTTATTGCCGAATGTGAGAGTGGGAAGTATGGCTTTGCCTTTGCCTCTGGTATGGCAGCACTT GGCACGATTTTAAGCCTATTTAAAAGCGGAGATTCTATCATCATCTCACAAAATGTCTATGGCGGCACTTTTAGAATCTT AGATAAAGTCTTTAAAAACTTTAATATCACTTATAAAATCGTAGATACAAGGGACTTAGACACGCTAGATTCTGCCCTAA CCACTGAAGTCAAAGCTGTGTTAATTGAAAGCCCTGCAAACCCACTTCTAAGCGTTACGCCTTTAGCAAAAGTCGCTGAA ATTTGCAAGAAAAAAGGTGTGCTAAGTATCGTGGATAATACCTTTATGACGCCCTATCTCCAGCAGCCCTTAAGGCTAGG CATTGACATTGTGGTGCATTCTGCGACAAAGTATCTTGGCGGACATAGCGACCTTGTAGCCGGGCTTGTGGTGGTAGATG ATGAGAATCTAGCTGAACGCATAGGCTTTTTGCAAAATAGCATTGGCGGTGTGCTTGCGCCATTTGATAGCTTTTTGCTT ATCCGCGGTATGAAAACACTAGGCTTACGAATGCAGCGACATTGTGAAAATGCCTTGTTTCTAGCAGAATCTTTAAGTGA GCATAAAGCGGTGGCAAAAGTGTATTATCCGGGGCTAAAAAGCGATAGCGAATATGAAGTGCAAAGCTCTCAAGCGCGTG GTGGCGGAGGAATGCTAAGCTTTATATTAAAGCCAGAATATGATTATAGAATCTTTTTTAAATCCGCGCGTATCATCGTT TTAGCGGAAAGCTTGGGAGGCGTGGAGAGTTTGCTCTGCCACCCTGCGAGTATGACTCACGCCTCTATTCCTAAAGATTT GCGTGAATCTATGGGGATAGCTGAAAATCTTATCCGCCTATCTGTTGGCATTGAATATAGCAAAGACTTGCTTGAAGATA TAAATCAAGCGATTGAAAAAAGTTGCGTGTAA Protein sequence : MQSTLDTTLIHGGLTTDPRTGAVNTPIFQTSTYAQDELGKHKGYEYSRTKNPTRDGIESLIAECESGKYGFAFASGMAAL GTILSLFKSGDSIIISQNVYGGTFRILDKVFKNFNITYKIVDTRDLDTLDSALTTEVKAVLIESPANPLLSVTPLAKVAE ICKKKGVLSIVDNTFMTPYLQQPLRLGIDIVVHSATKYLGGHSDLVAGLVVVDDENLAERIGFLQNSIGGVLAPFDSFLL IRGMKTLGLRMQRHCENALFLAESLSEHKAVAKVYYPGLKSDSEYEVQSSQARGGGGMLSFILKPEYDYRIFFKSARIIV LAESLGGVESLLCHPASMTHASIPKDLRESMGIAENLIRLSVGIEYSKDLLEDINQAIEKSCV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-90 | 53 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 6e-92 | 53 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 3e-65 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HCN_1173 | YP_006235499.1 | cystathionine gamma-synthase | BAC0207 | Protein | 1e-63 | 43 |
