Gene Information

Name : MY9_4180 (MY9_4180)
Accession : YP_006233968.1
Strain : Bacillus sp. JS
Genome accession: NC_017743
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4064584 - 4065294 bp
Length : 711 bp
Strand : -
Note : COGmatches:COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PfamMatches:PF00072.18

DNA sequence :
ATGATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGATATATTGGAATTTAACTTAAGAAAAGAAGG
CTATGAGGTGCACTGTGCCCACGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTAATTCTTTTAG
ATATTATGCTCCCTAATAAAGACGGCGTTGAAGTATGCCGTGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTG
ACGGCTAAGGATTCAGAAATTGACAAGGTTATCGGACTCGAAATCGGTGCTGATGACTATGTCACAAAACCATTCAGCAC
ACGCGAGCTTCTGGCGCGTGTAAAAGCGAATCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA
ATGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTATCAAAACGAGATGAAACAATCGAATTGACT
CATCGTGAGTTCGAATTGCTTCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACACTTGCTTCAAACCGT
TTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGACGTAACAGTCCGCCGGCTTCGTGAAAAAATTGAGGACAACC
CGAGCCATCCAAATTGGATTGTCACACGCCGCGGTGTAGGTTATTACTTGAGAAACCCAGAACAGGACTAA

Protein sequence :
MMDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIML
TAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELT
HREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-32 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_4180 YP_006233968.1 two-component response regulator NC_012469.1.7685629. Protein 2e-64 68
MY9_4180 YP_006233968.1 two-component response regulator NC_007622.3794472.p0 Protein 3e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_002745.1124361.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_009782.5559369.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_002951.3237708.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_003923.1003749.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_002758.1121668.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_009641.5332272.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_013450.8614421.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_007793.3914279.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator NC_002952.2859905.p0 Protein 4e-52 55
MY9_4180 YP_006233968.1 two-component response regulator HE999704.1.gene2815. Protein 2e-48 54
MY9_4180 YP_006233968.1 two-component response regulator AE016830.1.gene1681. Protein 3e-46 49
MY9_4180 YP_006233968.1 two-component response regulator NC_012469.1.7686381. Protein 1e-43 48
MY9_4180 YP_006233968.1 two-component response regulator FJ349556.1.orf0.gene Protein 1e-40 47
MY9_4180 YP_006233968.1 two-component response regulator AM180355.1.gene1830. Protein 2e-38 46
MY9_4180 YP_006233968.1 two-component response regulator AF155139.2.orf0.gene Protein 5e-37 45
MY9_4180 YP_006233968.1 two-component response regulator AE000516.2.gene3505. Protein 3e-37 45
MY9_4180 YP_006233968.1 two-component response regulator HE999704.1.gene1528. Protein 3e-32 44
MY9_4180 YP_006233968.1 two-component response regulator NC_014475.1.orf0.gen Protein 1e-36 43
MY9_4180 YP_006233968.1 two-component response regulator NC_005054.2598277.p0 Protein 1e-36 43
MY9_4180 YP_006233968.1 two-component response regulator DQ212986.1.gene4.p01 Protein 3e-36 43
MY9_4180 YP_006233968.1 two-component response regulator NC_007622.3794948.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_003923.1003417.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_013450.8614146.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_002951.3238224.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_007793.3914065.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_002758.1121390.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_010079.5776364.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator NC_002952.2859858.p0 Protein 5e-34 43
MY9_4180 YP_006233968.1 two-component response regulator AE015929.1.gene1106. Protein 8e-31 43
MY9_4180 YP_006233968.1 two-component response regulator CP000034.1.gene2186. Protein 2e-29 43
MY9_4180 YP_006233968.1 two-component response regulator NC_002695.1.916589.p Protein 2e-29 43
MY9_4180 YP_006233968.1 two-component response regulator BAC0039 Protein 2e-29 43
MY9_4180 YP_006233968.1 two-component response regulator AF130997.1.orf0.gene Protein 7e-36 42
MY9_4180 YP_006233968.1 two-component response regulator CP001918.1.gene5135. Protein 2e-27 42
MY9_4180 YP_006233968.1 two-component response regulator CP001918.1.gene3444. Protein 1e-28 42
MY9_4180 YP_006233968.1 two-component response regulator CP001138.1.gene2239. Protein 4e-28 42
MY9_4180 YP_006233968.1 two-component response regulator BAC0596 Protein 4e-28 42
MY9_4180 YP_006233968.1 two-component response regulator NC_002695.1.915041.p Protein 2e-31 41
MY9_4180 YP_006233968.1 two-component response regulator AF162694.1.orf4.gene Protein 1e-32 41
MY9_4180 YP_006233968.1 two-component response regulator CP000034.1.gene3834. Protein 2e-31 41
MY9_4180 YP_006233968.1 two-component response regulator CP004022.1.gene3215. Protein 7e-35 41
MY9_4180 YP_006233968.1 two-component response regulator CP004022.1.gene1676. Protein 1e-28 41
MY9_4180 YP_006233968.1 two-component response regulator CP000647.1.gene2531. Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_4180 YP_006233968.1 two-component response regulator VFG1389 Protein 9e-29 45
MY9_4180 YP_006233968.1 two-component response regulator VFG1390 Protein 1e-35 42
MY9_4180 YP_006233968.1 two-component response regulator VFG1563 Protein 5e-32 42
MY9_4180 YP_006233968.1 two-component response regulator VFG1702 Protein 4e-32 41