Gene Information

Name : MY9_3480 (MY9_3480)
Accession : YP_006233268.1
Strain : Bacillus sp. JS
Genome accession: NC_017743
Putative virulence/resistance : Virulence
Product : EpsC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3401044 - 3402840 bp
Length : 1797 bp
Strand : -
Note : COGmatches:COG1086 Predicted nucleoside-diphosphate sugar epimerases; PfamMatches:PF02719.9

DNA sequence :
ATGATTATTGCGCTGGATACTTACCTCGTTTTAAATTCAGTTATTGCAGGATATCAATTTTTAAAAGATTCCTATCAATT
TTATGACTCCGGAGCATTACTGCTTACCGCTGTCAGCTTGCTCCTCAGCTATCATGTGTGTGCTTTCCTGTTCAATCAGT
ATAAACAGGTGTGGACATACACCGGGCTCGGCGAGCTGCTTGTCCTGCTTAAAGGCATTACGCTTTCCGCCGCTGTGACC
GGCGTCATTCAGTATGCTGTGTATCATACGATGTTCTTTCGTCTGTTAACCGCGTGCTGGGTGCTTCAGCTTTTGTCCAT
TGGAGGGACCCGTATTTTATCCAGAGTATTAAACGAAAGCATTAGAAAAAAACGCTGCGCCTCGTCCCGCGCGCTGATTA
TCGGGGCGGGCTCGGGTGGGACTCTGATGGTCAGGCAGCTGCTTTCGAAAGATGAACCTGATATCATACCTGTTGCTTTT
ATTGATGACGATCAAACGAAACATAAATTAGAAATCATGGGGCTGCCCGTAATCGGCGGAAAAGAAAGTATCATGCCTGC
GGTGCAAAAGCTCAAAATTAACTATATTATTATTGCCATTCCTTCACTCCGCACCCATGAGCTTCAGGTGTTATATAAAG
AATGTGTGCGAACCGGAGTAAGCATTAAAATTATGCCTCATTTTGAGGAAATGCTGCTCGGCACACGAACTGCCGGACAA
ATCAGAGATGTAAAAGCTGAGGATCTGCTCGGCAGAAAGCCGGTGACCCTCGACACTAGCGAAATTTCAAACCGCATCAA
AGGAAAAACAGTTCTCGTCACGGGAGCGGGCGGATCAATCGGCTCGGAAATCTGCCGGCAGATCAGCGCGTTTTTGCCTA
AGGAAATCATTCTGCTCGGCCATGGGGAAAACAGCATTCATTCGATTTATACAGAGCTGAATGGACGATTCGGCAAACAC
ATTGTGCTCCATACGGAAATCGCTGATGTGCAGGACCGCGATAAAATGTTTACCTTGATGAAAAAGTACGAGCCGCATGT
TGTCTACCATGCAGCTGCCCATAAGCATGTCCCTTTAATGGAACACAATCCTGAAGAGGCGGTCAAAAACAATATTATCG
GAACAAAAAATGTCGCGGAAGCAGCCGATATGTCGGGAACTGAGACATTCGTGCTGATTTCATCAGACAAAGCGGTGAAC
CCAGCCAATGTAATGGGGGCGACAAAACGGTTCGCGGAAATGATTATTATGAATCTTGGAAAAGTCAGCAGTACCAAATT
TGTCGCTGTCCGCTTCGGCAATGTACTCGGGAGCCGCGGCAGCGTCATTCCGATTTTCAAAAAACAAATTGAAAAAGGCG
GCCCTGTGACAGTAACACATCCGGCAATGACCCGCTATTTCATGACGATTCCCGAGGCATCAAGGCTTGTGATTCAGGCT
GGGGTATTGGCGAAAGGGCGCCAGATTTTCGTTCTCGATATGGGGGAGCCCGTAAAGATTGTGGATCTGGCCAAAAACCT
CATCCATTTGTCAGGCTACACGACAGAGCAGATTCCAATCGAATTCACAGGCATTCGTCCCGGCGAAAAAATGTATGAAG
AATTACTGAACAAAAATGAAGTCCACGCTGAACAAGTCTTTCCAAAAATTCATATCGGCAAAGCGGTAGACGGCGACTGG
CCGGTGCTGATGCGCTTTATCGAGGATTTCACTGAACTGTCGGAAGCCGACCTGAGAGCGAGGCTGTTTGCGGCAATCAA
TACATCAGACAACATGACGGCTGCCAGTGTTCATTAG

Protein sequence :
MIIALDTYLVLNSVIAGYQFLKDSYQFYDSGALLLTAVSLLLSYHVCAFLFNQYKQVWTYTGLGELLVLLKGITLSAAVT
GVIQYAVYHTMFFRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGTLMVRQLLSKDEPDIIPVAF
IDDDQTKHKLEIMGLPVIGGKESIMPAVQKLKINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFEEMLLGTRTAGQ
IRDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAFLPKEIILLGHGENSIHSIYTELNGRFGKH
IVLHTEIADVQDRDKMFTLMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFVLISSDKAVN
PANVMGATKRFAEMIIMNLGKVSSTKFVAVRFGNVLGSRGSVIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQA
GVLAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELLNKNEVHAEQVFPKIHIGKAVDGDW
PVLMRFIEDFTELSEADLRARLFAAINTSDNMTAASVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-118 54
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-118 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_3480 YP_006233268.1 EpsC VFG1300 Protein 2e-120 53
MY9_3480 YP_006233268.1 EpsC VFG0029 Protein 4e-68 41