Gene Information

Name : MY9_1880 (MY9_1880)
Accession : YP_006231673.1
Strain : Bacillus sp. JS
Genome accession: NC_017743
Putative virulence/resistance : Resistance
Product : small multidrug efflux transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1913696 - 1914052 bp
Length : 357 bp
Strand : -
Note : COGmatches:COG2076 Membrane transporters of cations and cationic drugs; PfamMatches:PF00893.13

DNA sequence : 
ATGATGAAAGGATTGCTTTATTTGGCTCTCGCCATTTTATCTGAAGTGCTTGGAAGCACGATGCTGAAGCTTTCAGAAGG
ATTTACACAGGCCTGGCCCATTGCCGGAGTCGTAGTCGGATTTCTTTCTGCTTTTACGTTTTTAAGCTTTTCTTTAAAAA
CAATTGACTTATCAAGCGCGTATGCAACATGGTCGGGCGTTGGTACCGCGCTTACAGCCATTGTCGGTTTTTTGCTTTTT
GGCGAAACCCTCAGTTTAAAGGGAATATTCGGTCTCACGCTTGTCATTGCGGGCGTGGTCGTGCTAAATCAGTCGAAAGC
CCACGCTGAAGATAAAAAACAGACGGTCTGTGAGTAA

Protein sequence : 
MMKGLLYLALAILSEVLGSTMLKLSEGFTQAWPIAGVVVGFLSAFTFLSFSLKTIDLSSAYATWSGVGTALTAIVGFLLF
GETLSLKGIFGLTLVIAGVVVLNQSKAHAEDKKQTVCE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 1e-09 42
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 1e-09 42
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-09 42
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 1e-09 42
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-09 42
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-09 42
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-09 42
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-09 42
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-09 42
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-09 42
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 1e-09 42
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-09 42
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-09 42
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 1e-09 42
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 1e-09 42
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-09 42
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 1e-09 42
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-09 42
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 1e-09 42
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 1e-09 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0140 Protein 2e-37 92
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0139 Protein 9e-12 51
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0322 Protein 2e-11 48
MY9_1880 YP_006231673.1 small multidrug efflux transporter CP004022.1.gene1549. Protein 2e-13 45
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0192 Protein 2e-09 45
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0377 Protein 8e-14 44
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0321 Protein 8e-10 43
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0477 Protein 6e-07 43
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0323 Protein 5e-10 42
MY9_1880 YP_006231673.1 small multidrug efflux transporter NC_010410.6003348.p0 Protein 6e-11 42
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0002 Protein 6e-11 42
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0324 Protein 2e-09 42
MY9_1880 YP_006231673.1 small multidrug efflux transporter NC_002695.1.913273.p Protein 5e-13 41
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0150 Protein 5e-13 41
MY9_1880 YP_006231673.1 small multidrug efflux transporter BAC0216 Protein 5e-07 41