Gene Information

Name : HPPC18_04970 (HPPC18_04970)
Accession : YP_006229225.1
Strain : Helicobacter pylori PeCan18
Genome accession: NC_017742
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1049157 - 1050101 bp
Length : 945 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGACTTAGACAAACTCAAAGATTATAGGGCTTTAAGAAACGCTATTTTAAGGCTATTGCCTTATTTAGATAGCGGTAT
TACAGAGCTAATTATGAATAAAGAAAAAGAAATTTGGCTCTATAAGCTTAATGGAGTAAGAGAAAAAGTCTTTGATGAAA
ATTTAGACAAAGCCTTTATTCTGGGGTTTGGGGAACAATTAGCGAGTTTTAGAGATTTGTTTTTTAATGCTAATTATCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATACAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCAAGTGATAAAAAGTTTGATTTAAAAGCTTTCAAGCTTTCTAGTATCTGTCAATACGATTATG
AGTATTTACAAAACTTAATGATTGAGGGCAAAAACTTACTCATTAGTGGAGGCACAGGCAGTGGAAAAACGAGTTTTTTA
AACGCTCTAATTGAGTTTATCCCCAAACACACACGAATAGTAAGCGTTGAAGATAGCGAAGAATTAGATTTAAGAGCGTT
TGAAAATCATAAATCCTTGTTAGTGGATAAAACTGAAAGCTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGTCTCCTGATAGGCTTATGGTAGGCGAGATTGACACACGAAATTCCATGCTCTTTTTAAGATTTGGAAACACTGGG
CATAAAGGCATGGTTTCTACTTTACATGCAGATAGTGTGCATGGGGTTATAGAGGCGATTGCTTTAAATTTACAAATGAA
TAAAAGTGGTTTAGATGTCAATGTAGCAAAAAAATTCTTTAAAAGCAGTGTGGATATTGTCGTTCAAATTGTATTAGATA
AAGCCACTAACACCAGATACATTCAAGAAATCTTACCAGCAAAAGATTTAAGAGATAGCCTATGA

Protein sequence : 
MDLDKLKDYRALRNAILRLLPYLDSGITELIMNKEKEIWLYKLNGVREKVFDENLDKAFILGFGEQLASFRDLFFNANYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPSDKKFDLKAFKLSSICQYDYEYLQNLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLRAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNSMLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVNVAKKFFKSSVDIVVQIVLDKATNTRYIQEILPAKDLRDSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 9e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC18_04970 YP_006229225.1 VirB11 type IV secretion ATPase VFG1979 Protein 2e-41 41