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Name : HPPC18_04305 (HPPC18_04305) Accession : YP_006229099.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 889101 - 890618 bp Length : 1518 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCCGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCATTTGACAGAGAAAGAATCCCTGAAAGGG TCGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTTACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTTTTCAGATTTTCCACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCGGT AAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTGGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAACTTACCTAACCAC GACATGGTATGGGATTTTTGGAGCAATGTTCCTGAAAGCTTGTATCAAGTAACATGGGTTATGAGCGATAGAGGGATCCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTTAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTGAAACCATGCAAGGCGTTAAGCACTTGACTAACGAAGAAGCCGCAGAAATCAGAAAGCATGATCCAGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAAGACGCTAAGAAGTATCGATTCCATCCGTTTGATGTCACTAAAATTTGGTATCTCCAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCAGTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAAATACCGGTTAATAAACCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCCGGCTATAAAGAAGATAAGAGCACGAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGAGGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACACAAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSTRDP KFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 2e-92 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-90 | 47 |
