|
Name : HPPC18_04060 (HPPC18_04060) Accession : YP_006229052.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 841072 - 842337 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGAGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAGCACAAAGGCT ATGCTTTTGAAATCAGTGATGATTTAGAAAGCTTGATAGAAGATAAAGGGATTGATATTATCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAGCAAAAAGCTTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTATGAATTAGAACAAATCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAGCATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAAGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGCATTGACG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAGATAGAGCCAGATGACATGGAATTTGCAAAAGAGTTTGGTTAT AGCATCAAACTTTTAGGCATCGCTAAAAAACACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAACGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTCTTGC AAAAAGAAATCCCGCAATCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAAATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYAFEISDDLESLIEDKGIDIIVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPQSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 1e-67 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 1e-67 | 41 |
