|
Name : HPPC18_03745 (HPPC18_03745) Accession : YP_006228991.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 777854 - 779167 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTGTATGGAGCAATCCTGCCTTTGTGGCCATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATTAGCGCGACTCTCATAGCAGGGCTTATGGGAGGGCTTGGAATCACGGAGAGTTTTAACA TGATGATAGACGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAACCTCATTAAAGTCGCTCTGAATAAATTAATAGGCTTAATGGATTACAAGCGATCCACTTTTTGTTTTTTGAT CGCTTTCATCGCATGCTTTTCGCAGAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTGATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTGAGCACCACCATAGC GCAAATCACAGGAGTGATGTGGATAGCAGGATTAGCGATGGTCGTTGGGCTACTTTTAGCGGTATTAACGCTATACAAAA AACCCAGACACTACAAGGAAAAATCTTTTAATATAGAAGATTACGCCTCGCTTCAATTAAACTACCATGACTATTTGACT TTTATAGGGATTGTCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTACTAGGCCGTGGCATTAAGTTTAAAGAAACAGACTCTTTAATGGATGATAGCGTGAAGATGATGGCGTTTATCG CTTTTGTGATGCTAGTGGCTAGCGGGTTTGGGGAAGTGTTGCAAAAAGTGCATGCGATAGATGGCTTAGTGAATGCGATC ACAAGCGTGATCCAAGGGAAGTTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATTATCGCTGTGTTTTATGTCCCTTTATGCGCAAAATTAGGATTCAGTATAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCCTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCTACTTGCGGG CTTAATGCAGACAGCCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTTCTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSVWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNMMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALNKLIGLMDYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSTTIAQITGVMWIAGLAMVVGLLLAVLTLYKKPRHYKEKSFNIEDYASLQLNYHDYLT FIGIVVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIDGLVNAI TSVIQGKFLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADSQHNHIYDTCVPTFLVYNLPLIVFGVLGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-52 | 42 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-52 | 42 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 4e-52 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 4e-52 | 42 |
