Gene Information

Name : HPPC18_02575 (HPPC18_02575)
Accession : YP_006228781.1
Strain : Helicobacter pylori PeCan18
Genome accession: NC_017742
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein CagI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 535436 - 536575 bp
Length : 1140 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGTGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTTGTTTCTGAATGGTGGAGAGGTAGTAATAACGCTTGAACC
TGCCTTAAAAGCCATTCAAGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGGCTCAAT
CTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGGACTCAGCTTGCAACTATGAGCGCTATGTTA
AAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCTTGGCAT
CATGCAAGGGTATTCAAGCGCGCTTAGCGCATTGGGGGGAAATGTCAAAATGATCGTGGAAAAACAAAAAATTAATACCC
AAACAGAAATCCAAAACATGCAAATCGCGCTCCAAAAAAATAACGAAATGATCAAGCTCAAAATGAACCAGCAAAACGCT
CTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGCTCTAGG
AAGCTCTTCTGACAACACTAAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAGGTTTTG
AAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGACTACAATTCCCTAACAGGTCAGGCTTTGTTTCAAAGT
GCCATCTACGAGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCGTTGAAACATTCACTCTAGCACC
CACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAAAGATTG
TAGCCCTTATTCAAAATAAACTGAATGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAAATCAAA
ACTTTAAAAGGATCAGTAGATTTGAACGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTATATAGA
GAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTGCTGGCT
CTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFLFLNGGEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKAIQAQIEGELRTQLATMSAML
KGANGVINGVNGMTGGFFAGSDILLGIMQGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEMIKLKMNQQNA
LLEALKNSFEPSVTLKTQMEMLSQALGSSSDNTKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALFQS
AIYEPALSFFSSMGAPFGIVETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNDADFQNIAYLNGINEEIK
TLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIAGSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-148 97
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-148 97
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-148 97
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 3e-147 97
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 2e-147 97
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-147 97
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-147 97
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-147 97
cagI AAF80208.1 CagI Virulence cag PAI Protein 7e-148 97
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 1e-147 97
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 5e-147 96
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 5e-147 96
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 4e-147 96
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 4e-146 96
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-147 96
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-147 96
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-147 96
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-142 95
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-146 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC18_02575 YP_006228781.1 cag pathogenicity island protein CagI VFG0299 Protein 5e-148 97