Gene Information

Name : HPPC18_02480 (HPPC18_02480)
Accession : YP_006228762.1
Strain : Helicobacter pylori PeCan18
Genome accession: NC_017742
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 509608 - 510438 bp
Length : 831 bp
Strand : -
Note : COG0790 FOG: TPR repeat, SEL1 subfamily

DNA sequence :
ATGTTTGAAGATTTTTATCGCACTACCCTCTCTTTTTTAAAACCTTTCTTGCTTTTATTGGGTTTATTGTTGCCGTTTTC
GCTTTGTATAGCTGATGAATATATTAGCATAAATGATGATTGGGATGAAACTGCACGAAATCATAAGACATATTATTTTG
AAAATGGTTTAGACCATTTTAATCAAGGCCAATACAAGCAAGCCTTTAAAGATTTTAGATTGGCGCAAGAATACGGCATT
GGGCTTGGCAGCGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGTGGATTACAAAAAAGTGCAACTCTA
TGCAGAAAACGCTATCAAAGGGTATGGGAGCGGGTTGTTAGGGGGCACTCTTATTTTAGGACGCATGCAAGCAGAAGGCT
TAGGGATGAAAAAGGATTTGAAACAAGCGCTTAAGACTTACAGGCATGTGGTTCGCATGTTTTCTAATAAAAGCACAAAT
TTTACTAACAATTTTAGATTACCAAACCTTGCGGAATTTACTAGTATGCTTATTGGATCGCGATTCATTGATCTTTCAGG
TTTGAGCGCGAATCCTGAAAAATTTGGAAAGAAATTTGGAATACTTGTTAAGAAAGCCCTTCAAATCAAAGATAATACAC
TTTCTTGGGAAGACATTGCTGAAATTTCAAGCAATATTATTTTACTCAAACAACAAATGGGGGAAATTCTTTATAGGATT
GGGATCGCTTATAAAGAAGGGCTTGGCGTTAGAAAGAAAAAGGACAGGGCTAAAAAATTCCTGCAAAAATCCGCAGAATT
TGGCTATGAAAAAGCCATGGAAGCTCTGTAG

Protein sequence :
MFEDFYRTTLSFLKPFLLLLGLLLPFSLCIADEYISINDDWDETARNHKTYYFENGLDHFNQGQYKQAFKDFRLAQEYGI
GLGSVYLAKMYLEGKGVKVDYKKVQLYAENAIKGYGSGLLGGTLILGRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN
FTNNFRLPNLAEFTSMLIGSRFIDLSGLSANPEKFGKKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQQMGEILYRI
GIAYKEGLGVRKKKDRAKKFLQKSAEFGYEKAMEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_726 YP_003728747.1 chitin synthase regulatory factor 3 Not tested cag PAI Protein 1e-85 86