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Name : HPPC18_02440 (HPPC18_02440) Accession : YP_006228756.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 501518 - 502963 bp Length : 1446 bp Strand : - Note : COG0174 Glutamine synthetase DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAAATCAAAGAGTTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCATATCGCTTATTCTTTTGGGGCTTTAACGCATGACATGTTTA AAGAAGGGATTCCTTTTGATGCGAGCTCTTTTAAAGGCTGGCAAGGCATTGAACATTCGGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGTGCGGATGTGAGCGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCCTAAAACATTTAAGAGATTTGGGCTTAGGCGATGTGG CTTATTTTGGCGCAGAGAATGAATTTTTTATCTTTGATTCCATTAAGATTAAAGACACTTCCAATTCCCAATATTACGAA GTGGATAGTGAAGAGGGCGAATGGAATAGGGATAAAAGCTTTGAAAATGGCGTCAATTTTGGGCATAGACCGGGAAAGCA AGGAGGCTATATGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATTGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCACAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACGGCTACTTTCATGCC AAAACCCCTATATGGGGATAATGGGAGCGGGATGCACACCCATGTGAGCGTTTGGAAAAATAACGAAAACCTTTTTGGTG GCGAAACTTACAAGGGCTTGAGCGAGTTTGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACCAATTCTTACAAACGCCTGATTCCGGGATATGAAGCCCCATCCATTTTAACTTATTCAGCCAG CAATAGGAGTGCTAGCGTGCGTATCCCTTATGGGATTTCTAAAAATAGTGCTAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACCTGGCTTTTGGGGCTATTTTAATGGCAGGCATTGATGGCGTTAAAAATAAAATGGATCCCGGCGAA GCGATGGACATTAACCTTTTCAAGCTAACTTTGGACGAAATCAGAGAAAAAGGCATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATCCAGGCCT ATCAGTCTCTTAAATTCCATTCTGAAGTGTTCCCATGGGAGAGTAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHDMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALKHLRDLGLGDVAYFGAENEFFIFDSIKIKDTSNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFGGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSASNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGVKNKMDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFHSEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPPC18_02440 | YP_006228756.1 | glutamine synthetase | VFG1399 | Protein | 9e-89 | 45 |
