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Name : HPPC18_01790 (HPPC18_01790) Accession : YP_006228637.1 Strain : Helicobacter pylori PeCan18 Genome accession: NC_017742 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 367680 - 369605 bp Length : 1926 bp Strand : - Note : COG0021 Transketolase DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCGAACACGCTTCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTAGGGCTAGCTGATGTGATGGTGGTTTTAAGCTTGTACCTCAACACTA ACCCCACTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGACGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC TGAATTACACCACACCGAAGGCATTGAGATTACGACAGGCCCTTTAGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAACCCTTTTAGATAAAGAAGCGATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTGGCTGGGCACCTTCGCCTTGATAACCTCATTGTGATTTATGACAG CAATCAGATCAGCATTGAAGGCGCTATTAACATTAGTTTTAGCGAACAGGTTAAAATGCGTTTTTTAGCGCAAAATTGGG AAGTTCTAGAATGCGATGGGCATGACTATCAAGCCATTAATGACGCTTTAGAAGAAGCCAAAAAATCCCCTAAACCCACG CTTTTAATCGCTCATACGATCATTGGTAAGGGGGCTATTGGTTTAGAGGGGAGTGAAAAAACGCATGGATCGCCTTTAAA CAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAATCCTAATGAAAGCTTTATAATCAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAAGCCTTATGGGAAAAGTCCTTAAGCCCTAAAACAAAAGAA AAAATCCATGCGTTAAAGAATTTTGATTTTAACGCCATCCATTACCCCGCCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGTTTTTTGGGGGGGAGCGCGGATTTAGCCCCCT CCAATAACACGCATTTGAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGTTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCTAGCATGCGTTTGAGCGCTTTAATGAAACTAAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCGACGCACCAGCCCATAGAGCAATTGAGTCATTTACGAGCCTTGCCGCATTTCTATGCTTTCAGGCCTAGC GATGCTTTTGAAAATAAGGCTTGCATGCAAGTGGCGTTAAGTTTGAACGCCCCTAGCGCTCTTATTTTATCGCGCCAGAA TTTGCCCGTACTAGATGAGGTTTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA TCACGCTCGTTGCGAGCGGGAGCGAGGTCTCTTTGGCTTTAGAGAGCGCTAAGATTTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCGCCATGCTTTGATTTATTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAAAGT CTTAGTGATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACGTTACCGCTCAAGCTAAAAGGTTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLYLNTNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLDDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQTLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAINISFSEQVKMRFLAQNWEVLECDGHDYQAINDALEEAKKSPKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPNESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKTKE KIHALKNFDFNAIHYPAFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPHFYAFRPS DAFENKACMQVALSLNAPSALILSRQNLPVLDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIPT QVVSAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENVTAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 9e-98 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-86 | 41 |
