Gene Information

Name : HPPC18_01560 (HPPC18_01560)
Accession : YP_006228591.1
Strain : Helicobacter pylori PeCan18
Genome accession: NC_017742
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 322906 - 323787 bp
Length : 882 bp
Strand : +
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGCTGGGGAGCTATGGTGGGGAGGA
TTCGCCTGATGATATTTCGCGCGGGCTTTTTGCTGGGGAAGTGGGGATCCCACGGCTTTTGAAATTGTTTAAAAAATACC
ATCTCCTTGCGACTTGGTTTGCGCCGGGGCATTCTATTGAAACTTTTCCAGAGCAAATGAAAATGATCGTGGATGCAGGG
CATGAAGTGGGCGCGCATGGGTATTCGCATGAAAACCCTATCGCTATGACGGCCAAGCAAGAAGAAGACGTTTTGTTAAA
AAGCGTTGAGTTGATTAAAGATCTCACCGGCAAAGCCCCCACAGGCTATGTGGCGCCGTGGTGGGAGTTTTCTAATATCA
CTAATGAATTGCTTTTAAAACACGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCCTATTTCGTGCGC
GTGGGGGATAGTTGGAGCAAGATTGATTATAGTTTGGAGGCTAAGGATTGGATGAAGCCTTTAATCCGTGGGGTGGAAAC
CGATTTGGTGGAAATCCCTGCGAATTGGTATTTGGACGATTTACCGCCGATGATGTTTATCAAAAAATCCCCCAATAGCT
TTGGTTTTGTAAGCCCGCGCGATATAGGGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAGATGGATTATGCG
GTGTTTAGCATGACAATCCACCCTGATGTGAGTGCCCGCCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAGCATAT
CAACAAGCACGAGGGCGTGCGTTGGGTAACATTCAATGAAATCGCTGACGATTTCTTGAAACGAAGCCCCAGAAAAAAAT
AG

Protein sequence :
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLLATWFAPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRSPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 5e-111 76