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Name : HPSH112_04390 (HPSH112_04390) Accession : YP_006227572.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein CagU Function : - COG functional category : - COG ID : - EC number : - Position : 883368 - 884015 bp Length : 648 bp Strand : - Note : - DNA sequence : ATGAACGATACAACAGAGCACCATGGATCCAATTCGCTAAACGCTCCATCACCTAGCAACTCACAGAGCAATGATCTTTT AAATTTGCTAGACTCGTTATATCCTAAAGGGAGTTTAGGGGAGCAAAGATTTCACGAAGCTCTAAAGAATCAAGAAGAGT TGAAAAATATCCTAATAGAAATAGAAAAGCTACCGCAAGAAAAAAGGTATGAACTTCTGATGCAGATAGGACAAGCCAAA CAGAGAATAATGGAAGCATACGCTCATTCATTCTTGGGATATATAGGTGGACTAGAGCATCTGTTAGGACTATGTATGGG TGGGATATTTGTTTTGTTTGCAATCTATTTTGTATTTTTAAGAACTAGCAAAAACACGGATCTGGTGGAAAGTTTAAAAA CAAAACTAAAACTTCAGTATTTTTACTATGCCTTTGGTGTAGGTGCGGTTTTGTTTTTTGGATTAGAAACAATTAGATCT ATTTATGAACTATATATATTAGGAATTGGTAGCACTAACGATAAGGTGCTTTTTGTTTTGAAAAATATTTGCTTCATAGG TATGGGCTATTTGATCTATAAAGTTATTAAGGTCATTGGTATAAAAAATTTTATCTATGGTCTTTTCACTTCAAAGAAAC AAGAGTAA Protein sequence : MNDTTEHHGSNSLNAPSPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAK QRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNTDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRS IYELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVIKVIGIKNFIYGLFTSKKQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0531 | BAD14002.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-76 | 99 |
| cagU | YP_005779059.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| HP0531 | BAD13783.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| cagU | YP_005774538.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| HP0531 | BAD14056.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| HP0531 | BAD13864.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-76 | 99 |
| HP0531 | BAD13892.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-75 | 99 |
| cagU | YP_005777275.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-75 | 99 |
| HP0531 | BAD13947.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| HP0531 | BAD13810.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-76 | 99 |
| HP0531 | BAD13837.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 99 |
| cagU | YP_005775734.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-76 | 99 |
| cag11 | AAR03924.1 | Cag11 | Virulence | cag PAI | Protein | 2e-76 | 99 |
| cag-U | AAF80202.1 | Cag-U | Virulence | cag PAI | Protein | 3e-76 | 99 |
| cag11 | AAR03866.1 | Cag11 | Virulence | cag PAI | Protein | 2e-76 | 99 |
| cagU | AGC69798.1 | cag pathogenicity island protein U | Virulence | cag PAI | Protein | 4e-76 | 98 |
| HP0531 | BAD14030.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-76 | 98 |
| cagU | YP_003728733.1 | cag pathogenicity island protein U | Virulence | cag PAI | Protein | 6e-76 | 98 |
| cag11 | AAR03894.1 | Cag11 | Virulence | cag PAI | Protein | 7e-76 | 98 |
| HP0531 | BAD13974.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-76 | 98 |
| orf18 | NP_223198.1 | cag island protein | Virulence | cag PAI | Protein | 6e-76 | 98 |
| cag11 | AAR03955.1 | Cag11 | Virulence | cag PAI | Protein | 1e-75 | 97 |
| HP0531 | BAD13919.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-75 | 97 |
| HP0531 | NP_207327.1 | cag pathogenicity island protein (cag11) | Virulence | cag PAI | Protein | 2e-75 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSH112_04390 | YP_006227572.1 | cag pathogenicity island protein CagU | VFG0291 | Protein | 5e-76 | 97 |
