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Name : HPSH112_04275 (HPSH112_04275) Accession : YP_006227549.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : - COG ID : - EC number : 5.1.1.3 Position : 861598 - 862365 bp Length : 768 bp Strand : + Note : COG0796 Glutamate racemase DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTTTTAAAAGTGCAATCATTTGATGA AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG CTCTGGATTTTTTCAAACCGCACAAGATTGAATTATTGATTGTGGCATGCAACACAGCGAGCGCTCTAGCCTTAGAAGAG ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGAGCCAAGCATTTTAGCGATCAAACAACAAGTAAAAGATAA AAACGCCCCTATTTTAGTGTTAGGGACAAAAGCGACGATTCAATCCAACGCTTATGATAACGCCCTGAAACAACAAGGAT ATTTGAATGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTGCTAGAA ACTTGCATGCGTTATTATTTCACTCCATTAGAGATCTTGCCTGAAGTGGTTATTTTAGGTTGCACGCATTTTCCCTTGAT CGCTCACCAAATTGAGGGCTATTTTATGGAACATTTTGCCCTTTCAACGCCCCCCCTACTCATCCATTCTGGCGATGCTA TTGTGGAATATTTGCAGCAAAAATACGCCCTTAAGAAAAACGCATGCACATTCCCTAAAGTGGAATTTCATGCGAGTGGC GATGTGGTTTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAATTGTAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKVQSFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE MQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNACTFPKVEFHASG DVVWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 7e-102 | 98 |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-102 | 98 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 4e-98 | 98 |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-99 | 97 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-100 | 96 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-98 | 95 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 6e-99 | 95 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-99 | 95 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-97 | 93 |
