|
Name : HPSH112_03200 (HPSH112_03200) Accession : YP_006227347.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 640934 - 642247 bp Length : 1314 bp Strand : - Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATAAGTGCGACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAATG CAATGATAGATGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCTTAATGAACTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGTTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCGCTACCCTAGC GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGCTGTTGGGCTATTTGTCGCTGTATTAACGCTATACAAAA AACCCAGACACTACAAAGAAAAATCTTTTAACATAGAAAATTACGACTCGCTTAAATTAAACTACCATGACTACTTGACT TTTATAGGGATTATCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCTTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGTGGCATTAAGTTTAAAGAAACAGACTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTAATGTTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGCTTAGTGAATTCGATC ACAAGCGTCGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCATAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSIWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMNYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSATLAQITGVMWIAGLAMAVGLFVAVLTLYKKPRHYKEKSFNIENYDSLKLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNSI TSVVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-57 | 41 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-57 | 41 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 1e-57 | 41 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-57 | 41 |
