Gene Information

Name : HPSH112_01850 (HPSH112_01850)
Accession : YP_006227084.1
Strain : Helicobacter pylori Shi112
Genome accession: NC_017741
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 374404 - 375285 bp
Length : 882 bp
Strand : +
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGCTAGGGAGCTATGGCGGGGAGGA
TTCGCCTGATGATATTTCGCGCGGGCTTTTTGCGGGCGAAGTGGGGATCCCACGGCTTTTGAAATTGTTTAAAAAATACC
ATCTCCCTGCGACTTGGTTTGCGCCTGGGCATTCTATTGAAACTTTCCCTGAACAAATGAAAATGATCGTGGATGCAGGG
CATGAAGTGGGTGCGCATGGGTATTCGCATGAAAACCCTATCGCTATGAGCACCAAGCAAGAAGAAGATGTTTTGTTAAA
AAGTATTGAATTGATTAAAGATCTCACTGGCAAAGCCCCCACAGGCTATGTGGCGCCGTGGTGGGAGTTTTCTAATATCA
CTAATGAATTGCTTTTAAAACATGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCTTATTTCGTGCGC
GTGGGGGATAGTTGGAGCAAGATTGATTATAGTTTGGAAGCTAAGGATTGGATGAAGCCTTTGATCCGTGGGGTGGAAAC
CGATTTGGTGGAAATCCCTGCGAATTGGTATTTGGACGACTTGCCGCCGATGATGTTTATTAAAAAATCCCCCAATAGCT
TTGGTTTTGTAAGCCCGCGCGATATAGGGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAGATGGATTATGCG
GTGTTTAGCATGACAATCCACCCTGATGTGAGCGCCCGCCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAGCATAT
CAACAAGCACGAGGGCGTGCGTTGGGTAACATTCAACGAAATCGCTGACGATTTCTTAAAACGAAGCCCCAGAAAAAAAT
AG

Protein sequence :
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMSTKQEEDVLLKSIELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRSPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 4e-111 76