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Name : HPSH112_01400 (HPSH112_01400) Accession : YP_006226996.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 276459 - 277526 bp Length : 1068 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGCTAAATAACAAACTCACCAAATCTCAAAGAGAACTTTTTGATAATCTCAAAGTCTTTTTATACACTAAGGTTAAAAA TTTCACACCTATTCAAGATGTGAATGATATGGCTTTGATATTAAATACGCAAAACAAAGTTTTAAAATGCAATAATGTTG AGCAATTAAGACAACTCTGTCATATTCTTTATAATCAAGGTATCAAACACACCATAATGATGCAAGGCTTGTTTTTATTC TTTGAATACTTTAGAGACAATCTGAAACTAAGAAGTTTTAGAATGCTTAGTGAAGAGCAAGTCATTAACTTTCTTTTTGA ACTCGCTCAAAATAGAAAACCAAGCTCTATGGCCAAGTATGTGATGTATTTAAGGCAATTCTTTGATTACTTGGATAGAA AAAAGCATTATAACTTTGACTTTGCTCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC TACAAGGATTTAAAGAGTTTTTTAAAAACACTTTTAGAATATAAGCCAACCACTAGCTTTGAAAAGCGCAATAAGTGTGT TTTACTCATTGTAATACTGGGAGGGCTTAGAAAATGCGAAGTGTTAAACATAGAGTTAAAACACATTCAAGTAGAAGAAC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGGAAAGAAAGAAAAGCTTATATCAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGATTACAGATTAAAATATTTCAATGGAGCATATCTCTTTAAAAAGGATAAGCAAAAATC ACAAAATTCTTTAACTCTTTATAATTTTATCCCCTTAATCTTTAAATTAGCCCAAATCAAACATTACAAACAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCTACGCTTATCTATCAAGAGACCCAAGACTTAGTTTTAACTTCAAGAGCT TTAGGGCATAGCTCATTACTCTCTACTAAGATTTATATCCATACCACACAAGAGCATAACAAGAAAGTAGCTCTTGTATT TGATAGTTTGATAGATAATAAGAAGTAA Protein sequence : MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILNTQNKVLKCNNVEQLRQLCHILYNQGIKHTIMMQGLFLF FEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLN YKDLKSFLKTLLEYKPTTSFEKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDDYRLKYFNGAYLFKKDKQKSQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIDNKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 1e-100 | 63 |
