Gene Information

Name : HPSH112_01290 (HPSH112_01290)
Accession : YP_006226978.1
Strain : Helicobacter pylori Shi112
Genome accession: NC_017741
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 249187 - 250131 bp
Length : 945 bp
Strand : +
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGACTTAAACAAACTCAAAGATTATAGGGCTTTAAGAAACGCTATTTTAAGGCTCTTGCCTTATTTAGATAGCGGTAT
TACAGAGCTGATTATGAATAAAGAAAAAGAAATTTGGCTCTATAAGCTTGATGGAACTAGAGAAAAAGTCTTTGATGAAA
ATTTAGATAAAGCCTTTATGCTTGGTTTTGGGGAACAATTAGCGAGTTTTAGAGATTTGTTCTTTAATGCTAATTACCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATACAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCTAGCGAGAAAAAGTTTGATTTAAAAGCTTTCAAGCTTTCTGGTGTGTGTCAATACGACTATG
AGTATTTACAAAAGCTGATGATTGAGGGTAAAAACTTACTCATTAGTGGAGGAACAGGCAGTGGAAAAACAAGTTTTTTA
AACGCTCTGATTGAATTTATCCCTAAACACACACGAATAGTGAGTGTAGAAGATAGCGAAGAATTAGATTTAAGAGCGTT
TGAAAATCATAAATCCTTGTTAGTGGATAAAACTGAAAGCTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGAGTCCTGATAGACTTATGGTAGGCGAGATTGACACACGAAATGCCTTGCTTTTTTTAAGGTTTGGCAACACAGGA
CATAAGGGAATGGTTTCTACTTTACATGCAGATAGTGTGCATGGGGTCATAGAGGCGATTGCTTTAAATCTACAGATGAA
TAAAAGTGGTTTAGATGTCAGTGTAGCAAGAAAATTCTTTGAAAGCAGTGTAGATATTGTCGTTCAAATTGTGCTTGATA
AAGCCACTAACACTAGATATATTCAAGAAATCTTACCCACCAAAGAATTAGAAAGTAGCTTATGA

Protein sequence : 
MDLNKLKDYRALRNAILRLLPYLDSGITELIMNKEKEIWLYKLDGTREKVFDENLDKAFMLGFGEQLASFRDLFFNANYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPSEKKFDLKAFKLSGVCQYDYEYLQKLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLRAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNALLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVSVARKFFESSVDIVVQIVLDKATNTRYIQEILPTKELESSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 1e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSH112_01290 YP_006226978.1 VirB11 type IV secretion ATPase VFG1979 Protein 2e-41 41