Gene Information

Name : HPSH112_07075 (HPSH112_07075)
Accession : YP_006228091.1
Strain : Helicobacter pylori Shi112
Genome accession: NC_017741
Putative virulence/resistance : Virulence
Product : conjugal plasmid transfer system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1441086 - 1442627 bp
Length : 1542 bp
Strand : -
Note : COG3504 Type IV secretory pathway, VirB9 components

DNA sequence :
ATGAAAAAACTCACTCTATCGCTATTTTTATATTGCGCTTTACTTAGTGCTGAAGAGGATATTTTTAGAAACCATACAAA
TGAAACTGATCTTACAAGTTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA
GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA
AATAGAAAATTGCAAGACAATAATTTTAATGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT
GACTACCACTTTTATTTTTGACAATGATCCTATTATCTATGTGAGTTTAGGAGATTCTAGCGGATTTGAACTCACTTACC
CCACTAATGATCATTACGACTTGTCCAACATGCTAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACCGTA
GTCGGAGCGAGCGGAACAATTTATACTTTTTACTTGTTTAGCACCACTTACACTAGCAAATTTCAAAGCTATTTTTCAGT
GTTTGTCTCTAATAAAAGGGCTATCGGTAAGCTCAATATTTTGTCTAAAAACGAGCTAGAAAAAAGGGAGCAAGAACAAT
GGGCTAAAACAGAAACAAATACAAATAGCTCCAATAAACAAGACAAACAAAAGCTTGACTACAGAAAAATCAATTATGAG
AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAGGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA
TCGTGGTTATTTGCAAAAACCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC
TTGATATAAAGGCACTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA
TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTATATTATTGCTGA
AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTAAGAAGAGATAAACACAAATACCAAAAAT
CTAAGGACTTCATGCGCTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAACAACGTTCACTTGATT
GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGATCAAATCAAAAACCAAACTCCAAATGA
AAAATGCCGATCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCCAAGCCTTTGC
AAAAAGATTTGAAAAACAAGCTTAAAAAACACACAATCAAAACCCATTATTGCGTGCCTATCCCCTATATAGAAAGACCA
AAAACCACTGATGGTTTAGAGAATAATAAAAAGGGGATGAATAACACCCCAAAACAAAATCAAGCAAACCCTATTAAAGA
GATTAAAGAAAACAAGAAATGA

Protein sequence :
MKKLTLSLFLYCALLSAEEDIFRNHTNETDLTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK
NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDSSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV
VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKNELEKREQEQWAKTETNTNSSNKQDKQKLDYRKINYE
SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK
FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNVHLI
EDTTPQPKNAISVTELLDQIKNQTPNEKCRSLNEEEVKTLEEVKNIIKAPKPLQKDLKNKLKKHTIKTHYCVPIPYIERP
KTTDGLENNKKGMNNTPKQNQANPIKEIKENKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB9-1 YP_002301099.1 VirB9 type IV secretion protein Virulence cag PAI Protein 0.0 98