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Name : HPSH112_06950 (HPSH112_06950) Accession : YP_006228070.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : integrase/recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 1413115 - 1414191 bp Length : 1077 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGAAAAAATCAAATGACAATAACGCACTCGCCAGAAGTCAAAGGGAGTTGTTTGTAGGGATTAGGGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAACGGAGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAATTATGTCATACAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTGTTTTTATTCTTTGACTATTTTTGCAAGAATTTGAAAGTTAAGCGATTGAGACTAATCAATGAAGAAATGCTTGTGAA TTTTTTATTTGAGTTAGCTAAACAAAGAAAGATTAATTCAATGGCAAAATATGTAATGTATATTAGGCAATTTTTTGATT ACTTGGATAGGACTAAACATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACACAAGGATAATTTGCCT AAACATCTAAATTCAAAAGATTTAAAATCTTTTGTATATACTCTTATAAACTATAGAACTAGAAGCAGTTATGAAAAGAG AAATAAGTGTATTTTACTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTAATTTAGAATTGAGAAATATTG TTTTAGAGAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAGCGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGGGTGATAGCAAACGATTGAGTAGTTTTAATGGGCGTTTTGTATTTAAGAAGTC TTTGTCTAACTATACTCAAAAGTATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGCACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGCTAAGAGTAGGGATATTGTT TTGACTTCAAGAGCATTGGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATATAATAAACA AGTAGCAAGCATTTTTGATAATTTGTTGAGTGGGTGA Protein sequence : MKKSNDNNALARSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHTIYNQGTKHILMMRV LFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLP KHLNSKDLKSFVYTLINYRTRSSYEKRNKCILLLIILGGLRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLGDSKRLSSFNGRFVFKKSLSNYTQKYCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYAKSRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 9e-88 | 56 |
