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Name : HPSH112_05875 (HPSH112_05875) Accession : YP_006227857.1 Strain : Helicobacter pylori Shi112 Genome accession: NC_017741 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein NupC Function : - COG functional category : - COG ID : - EC number : - Position : 1209737 - 1210993 bp Length : 1257 bp Strand : - Note : COG1972 Nucleoside permease DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTAGCAATAAAAG GGCTATTAATTATCGCACGATTATCAGCGCGTTTGTGATCCAGGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGCTACAAGGTTTAGCTAGTGGCATACAAAGCGTGATTGGTTATGGCTATGAGGGGGTGCGTTTTTTATTT GGGAGTCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCTATTAATGTTTTAGCGATCATTAT CTTTTTTGCCAGTTTGATTTCACTCCTATACTATTTAAAAATCATGCCTTTAGTGATCAACCTCATCGGTGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGTGCAGCGGCTAATATTTTTGTAGCGCACACAGAAGCGCCCTTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATTTTTGCAGTCATGTGCGTGGGCATGGCTAGCGTTGCGGG GCCGGTGTTGGCCGGGTATGCGAGCATGGGCATTCCTTTACCTTATTTAATAGCCGCTTCGTTTATGTCCGCTCCTGGGG GTTTATTGTTCGCTAAAATCATTTACCCGCAAAACGAAACCATTTCCAGCCATGCAGATGTTTCTGTAGAAAAGCATGTC AATGCCATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCTTTGCATGTGGGAGCGATGCTTTTAGCCTT TGTGGGGATGCTTGCGCTCATTAACGGGCTTTTAGGGGTTGTAGGGGGGTTTTTAGGCATGGAGCATTTGTCTTTGGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCTTTTATGCTAGGCATTCCTTGGAGCCAGGCCGGGATTGCTGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTACCTTATTTGGGCGATAACCCTCCTCTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACTTTTGCGTTGTGCGGGTTTGCTAACTTAAGCTCAGTCGCTATGCTTATTG GGGGGCTTGGCAGTTTAGTGCCTAAAAAGAAAGATCTCATTGTAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCTGGGTTATTCATAGGGCTAAACGCTCATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSSNKRAINYRTIISAFVIQVALGALALYVPLGREMLQGLASGIQSVIGYGYEGVRFLF GSLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSVEKHV NAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIVRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 1e-49 | 41 |
