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Name : HPSH169_04210 (HPSH169_04210) Accession : YP_006226024.1 Strain : Helicobacter pylori Shi169 Genome accession: NC_017740 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 860847 - 862112 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAGAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGTGTGGAAATCATGATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCGCAAAGGCT ATCCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAGATCGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTATCACCGCTATGAATTAGAACAAATCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACCAGCAATTAC ATTTTAAGCCAAATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGATGCCCAACATTTAGGCTATGCGGAATT AAACCCTGAATTTGACATTAAAGGCATTGATGCGGCGCATAAGTTATTGATCTTAGCGTCTTTAGCCTATGGCATTGATG CAAAATTAGAAGAAATTTTAATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAATTTGCTAAAGAATTTGGTTAT AACATTAAACTTTTAGGCATCGCTAAAAAACACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATAAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACTGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAGATCCAATGCGCTTATTATGTGCGTTTGTT GGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTTTTAC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGTTAAACGCC CTTAAAGAGCTTGAAAATCTAAAAAGCGTGCTAGACACCCCTAAAATGATCCGTTTGGAACATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIMIKKAVVRDVKKRKGYPFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY NIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYVRLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLKSVLDTPKMIRLEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 9e-61 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 9e-61 | 42 |
