|
Name : hslU (HPSH169_02645) Accession : YP_006225721.1 Strain : Helicobacter pylori Shi169 Genome accession: NC_017740 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : - COG ID : - EC number : - Position : 532841 - 534163 bp Length : 1323 bp Strand : + Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit DNA sequence : TTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAATACATCATTGGGCAAAAGGAAGCTAAAAAGTCTATCGC TATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATCACGCCTAAAAACATTTTAA TGATTGGATCTACTGGCGTGGGTAAAACTGAAATCGCAAGAAGAATAGCAAAAATCATGAAACTCCCCTTTGTAAAAGTG GAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAATAACAGCGT GCTTTTAGTGGAAAATGAGCATAAAGAAAAGTTAAAAGATAAGATTGAAGAAGCGGTTATAGAAAAAATCGCTAAAAAAC TCCTACCCCCCTTGCCTAATGGGGTGAGCGAAGAAAAAAAACAAGAATACGCTAACAGCCTTTTAAAAATGCAACAAAGA ATCGTGCAAGGCGAGTTGGATAGCCGAGAAATTGAAATTGAAGTGCGTAAAAAAATCATAGAGATTGATTCTAATGTGCC GCCTGAAATTTTAAGGGTTCAAGAAAATGTGATTAAGTTTTTCCATAAAGAACAGGATAAAGTCAAAAAAACTTTAAGCG TTAAAGAGGCTAAAGAAGCCCTAAAGGCAGAAATTAGCGACACGCTTTTAGATGGCGAAGCCATTAAAATGGAAGGCTTG AAGCGTGCGGAAAGTTCAGGGGTGATCTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGGAGGCCGTCA AGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTATTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGTATGGTCCTA TTAAAACAGAGCATATTTTATTCATTGCAGCGGGGGCTTTTCATCTTTCTAAGCCAAGCGATCTCATCCCTGAATTGCAA GGGCGTTTCCCTTTAAGGGTGGAGTTAGAGAGTTTAACCGAAGAAATCATGTATATGATTTTAACCCAAACTAAAACCTC TATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAAGGCGTAGAAATTGCGTTTGAAGACAATGCGATCAAAGAGTTAG CCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAAAAAGTGCTA GAAGACATTAGTTTTGAAGCGGAGGACTATTCTGGGCAAAATGTTACTATCACTAAAGAGTTGGTCCAATCAAAGCTAGA GGATTTAGTGGCTGATGAAAATTTAGTGAAGTATATTTTATAA Protein sequence : MNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMKLPFVKV EASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVSEEKKQEYANSLLKMQQR IVQGELDSREIEIEVRKKIIEIDSNVPPEILRVQENVIKFFHKEQDKVKKTLSVKEAKEALKAEISDTLLDGEAIKMEGL KRAESSGVIFIDEIDKIAVSSKEGGRQDPSKEGVQRDLLPIVEGSVVNTKYGPIKTEHILFIAAGAFHLSKPSDLIPELQ GRFPLRVELESLTEEIMYMILTQTKTSIIKQYQALLKVEGVEIAFEDNAIKELAKLSYNANQKSEDIGARRLHTTIEKVL EDISFEAEDYSGQNVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 97 |
