Gene Information

Name : HPSH169_01115 (HPSH169_01115)
Accession : YP_006225421.1
Strain : Helicobacter pylori Shi169
Genome accession: NC_017740
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 213674 - 214615 bp
Length : 942 bp
Strand : +
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGATTTCTAATCTTTTAAAAAGTTACCTTGATGACTTTATGCCTATTTTAAGCCAGCCTAATTTAAATGAAGTGGTTTT
TAATAAAGAAAAAGAGTATTTCTTGCACCGCCCAAAGGAAAAAGTGAGGTGTTTTAATGAAAAATTTACTAATGATTATT
TGTTAGTTTTTTGTGAGCAATTAGCCATTTTTAGAAACCAAAAATTCACTCTAAAAACGCCTAAGTTAAACACTTCTTTG
CCTTACACACAAATTAGAATTAACGCATTACACCCTAGCATTATTGCTAGTTCTAATATTTCTATCAATATCAGAGTGCC
TAGCAATTTCAAGTTTGAAATTAACGCCTTTAAATTAAGTGAGAAATGTCTGGCTAAAAACATTACCCATGATTTTTTAC
TTAGCTTAGTAAGTGCAGGTAAAAATATTTTAATAAGTGGTGGCACAGCTAGTGGCAAGACTAGCTTTGTTAATTCTTTG
ATTGAAAATATCCCCAAAAACGAAAGGGTGGTTACTATTGAAGATAGTCCTGAGTTAAAAATCAGTAACGAAGACCAAGT
TAATATTTTAGTAGATAAAAGTGGGAGCGGATTTTTTACTTATGAAGATGGATTAAATGCGGCTATGAGAATGTCTCCTG
ATAGATTATTATTAGGTGAAATTGACACGCATAATACTGCGTTATTTTTGCGTTTAGCAAATACTGGGCATAGCGGAATG
ATAAGCACCTTACACGCCAATAGTGTAGCAGATGCTTTTATAGCTATTTGTCAGAATATAAACTTGAATAAAGGCGGTAA
ACCTACGCCTAAAGAAACGCTTTTAGATTATTTTTGCACTGGTATGGACTATGTTATCCAAATCAAAAAAAAAGGTAGTG
ATAGGATAATTGATGATGTTTTAAATGTTAAAAGCGAATTTAAAAAGGAGTTGATGTTATGA

Protein sequence : 
MISNLLKSYLDDFMPILSQPNLNEVVFNKEKEYFLHRPKEKVRCFNEKFTNDYLLVFCEQLAIFRNQKFTLKTPKLNTSL
PYTQIRINALHPSIIASSNISINIRVPSNFKFEINAFKLSEKCLAKNITHDFLLSLVSAGKNILISGGTASGKTSFVNSL
IENIPKNERVVTIEDSPELKISNEDQVNILVDKSGSGFFTYEDGLNAAMRMSPDRLLLGEIDTHNTALFLRLANTGHSGM
ISTLHANSVADAFIAICQNINLNKGGKPTPKETLLDYFCTGMDYVIQIKKKGSDRIIDDVLNVKSEFKKELML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 1e-135 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSH169_01115 YP_006225421.1 VirB11 type IV secretion ATPase VFG1979 Protein 4e-46 42