|
Name : HPSH417_04740 (HPSH417_04740) Accession : YP_006224577.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Unknown Product : phosphoglyceromutase Function : - COG functional category : - COG ID : - EC number : 5.4.2.1 Position : 977661 - 979136 bp Length : 1476 bp Strand : + Note : COG0696 Phosphoglyceromutase DNA sequence : ATGGCGCAAAAAACTCTTTTGATCATCACTGATGGCATCGGGTATCGTAAAGATAGCGACTATAACGCATTCTTTCATGC TAAAAAACCCACTTATGACTTGATGTTTAAAACCTTGCCTTACAGCCTAATTGATACGCATGGCTTGAGCGTGGGTCTAC CTAAGGGGCAAATGGGAAATTCTGAAGTGGGGCATATGTGTATTGGGGCTGGTAGGGTGCTGTATCAAGATTTAGTTAAA ATTTCTTTAAGCCTTCAAAACGATGGCTTAAAAAACAACCCCACTTTTTTAAACACGATCCACAAAAGCAAAGTGGTGCA TCTTATGGGTTTAATGAGCGATGGAGGCGTGCATTCACACATTGAGCATTTTATCGCTCTGGCTTTAGAGTGTGAAAAAT CCCATAAAAAAGTCTGTCTGCATTTAATCACCGATGGGCGCGATGTCGCTCCTAAAAGCGCTTTAACTTATTTAAAACAA ATGCAAAATATCTGCAATGAAAACATTCAAATCGCTACCATAAGCGGTCGTTTTTATGCCATGGATAGGGATAAGCGCTT TGAAAGGATTAAGCTTGCGTATCATAGCTTAATGGGGCTTAATCACACGCCTTTAAGCCCTAGCGAGTATATCCAAAGCC AGTATGATAAAAATACCACCGATGAATTTATCATGCCCGCTTGTTTTAAAGATTATTGCGGCATGCAAGATGGTGAAAGC TTCATTTCTATCAATTTTAGGAATGATAGGGCTAGAGAAATCGTGAGCGCTTTAGGCCAAAAGGAATTCAATGGCTTTAA GCGCGAAACTTTTAAAAAACTCCATATCGCTACCATGACGCCTTATGATAACACTTTCCCCTACCCTGTTTTATTCCCCA AAGAAAGCGTTCAAAACACGCTCGCTGAAGTGGTCTCTCAACACAACCTGACTCAAAGCCATATCGCTGAAACTGAAAAA TACGCGCATGTAACCTTTTTCATCAATGGCGGAGTGGAAGCGCCTTTTAAAAATGAAAACCGGGTGCTTATCCAAAGCCC AAAAGTAACCACTTATGACTTAAAGCCTGAAATGAGCGCTAAAGAAGTAACCCTTGCGGTGTTAGATCAGATGGAATTAG GCACGGATTTGATCATTGTGAATTTTGCTAATGGCGATATGGTGGGGCATACGGGGAATTTTGAAGCGAGCATCAAAGCG GTAGAAGAAGTGGATGCATGCTTAGGGGAAATCCTTTCACTGGCTAAAAAATTGGATTACGCCATGCTTTTAACCAGCGA TCATGGGAATTGCGAACGCATGAAAGATGAAAATCAAAACCCCTTAACCAACCACACCGCCGGGAGCGTGTATTGTTTTG TTTTAGGGAATGGAGTTAGATCCATTAAAAACGGAGCGCTAAACAATATCGCTAGCAGCGTGTTAAAACTCATGGGCATT AAAGCCCCAGCAACGATGGACGAACCCCTATTTTAA Protein sequence : MAQKTLLIITDGIGYRKDSDYNAFFHAKKPTYDLMFKTLPYSLIDTHGLSVGLPKGQMGNSEVGHMCIGAGRVLYQDLVK ISLSLQNDGLKNNPTFLNTIHKSKVVHLMGLMSDGGVHSHIEHFIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQ MQNICNENIQIATISGRFYAMDRDKRFERIKLAYHSLMGLNHTPLSPSEYIQSQYDKNTTDEFIMPACFKDYCGMQDGES FISINFRNDRAREIVSALGQKEFNGFKRETFKKLHIATMTPYDNTFPYPVLFPKESVQNTLAEVVSQHNLTQSHIAETEK YAHVTFFINGGVEAPFKNENRVLIQSPKVTTYDLKPEMSAKEVTLAVLDQMELGTDLIIVNFANGDMVGHTGNFEASIKA VEEVDACLGEILSLAKKLDYAMLLTSDHGNCERMKDENQNPLTNHTAGSVYCFVLGNGVRSIKNGALNNIASSVLKLMGI KAPATMDEPLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00298 | YP_008207763.1 | Phosphoglyceromutase | Not tested | AbaR25 | Protein | 2e-89 | 44 |
| BJAB0868_00302 | YP_008211628.1 | Phosphoglyceromutase | Not tested | AbaR26 | Protein | 2e-89 | 44 |
