|
Name : HPSH417_04105 (HPSH417_04105) Accession : YP_006224455.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Virulence Product : N-acetylneuraminic acid synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 833591 - 834628 bp Length : 1038 bp Strand : - Note : COG2089 Sialic acid synthase DNA sequence : ATGGATTTTATTTTAGGCACTAGAAAAATTGGCATCAACCACACGCCTTTAGTGGTAGCTGAAATAGGGATCAACCATAA TGGCAGTTTGGAAATCGCTAAACTCATGGTGGATGCAGCTAAAGAAGCTGGCATTGAAGTGATCAAACACCAAACGCACA TTATTGAAGATGAAATGAGTTTGAGCGCTTTAAAGGTCATTCCTGGTAATAGCGAGTTAAGCATTTATGAAATCATGAAA AAATGCGCTTTGAGCAAGAACGATGAAAGGGAATTGAAAGAATATGCAGAAAAACAAGGGCTGATTTTTCTCTCTACGCC TTTTAGCCGAGCAGCAGCGAATTTTTTAGAAGATTTAGGCGTTGTGGGCTATAAAATAGGCTCTGGTGAAATGAATAATA CCCCCTTATTGAAGCATATTGCCAACTTTAAAAAACCCATGATTATTTCTACTGGGATGCATGATTTAGAGGGCGTGAAA GAGTGTGTAAGCCCTATTTTAGATAAAGCGCCAATCGCTCTTCTCCATACGACAAACCTCTACCCCACGCCTTTTGAATT GGTGCGCTTAAACGCTATGTTGGATTTAAAGAACGCGTTTAAGGTGCCGGTGGGTTTGAGCGATCACACTTTAAACAATA ACGCTTGCAAGAGCGCTTTAGCTCTTGGAGCGAGCATCGTGGAACGGCATTTTACGGACACTAAAGACAGAGAGGGGCCT GATATTGTTTGCTCTATGGATAAAGAAGAGGCTAAAGATTTAGTCAAAAGTGCTCAAGAGATTTTTTTAATGCGTGGAGG GAGTAAGACGAAAATTAAAGAAGAGCAAGTCACACGAGATTTTGCTTTCGCCACTATGGTGGCTATCAAACGCATCAAAA AAGGCGAAAAAATCACTGAAAGTAACGCATGGGTGAAACGCCCGGGAGTTAAAGGGATTTTAGCGAAGGATTACGAAAAG ACTTTGGGTAGAGTGGCTAAAATAGACATCAATACAGACGAACACATCTGCGATGAAATGCTAGAAAATAAGGAATAA Protein sequence : MDFILGTRKIGINHTPLVVAEIGINHNGSLEIAKLMVDAAKEAGIEVIKHQTHIIEDEMSLSALKVIPGNSELSIYEIMK KCALSKNDERELKEYAEKQGLIFLSTPFSRAAANFLEDLGVVGYKIGSGEMNNTPLLKHIANFKKPMIISTGMHDLEGVK ECVSPILDKAPIALLHTTNLYPTPFELVRLNAMLDLKNAFKVPVGLSDHTLNNNACKSALALGASIVERHFTDTKDREGP DIVCSMDKEEAKDLVKSAQEIFLMRGGSKTKIKEEQVTRDFAFATMVAIKRIKKGEKITESNAWVKRPGVKGILAKDYEK TLGRVAKIDINTDEHICDEMLENKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| siaC | NP_273132.1 | polysialic acid capsule biosynthesis protein SiaC | Not tested | IHT-A | Protein | 2e-83 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSH417_04105 | YP_006224455.1 | N-acetylneuraminic acid synthetase | VFG0252 | Protein | 7e-84 | 56 |
