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Name : HPSH417_04100 (HPSH417_04100) Accession : YP_006224454.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 832353 - 833537 bp Length : 1185 bp Strand : - Note : COG0381 UDP-N-acetylglucosamine 2-epimerase DNA sequence : TTGGAAAGCCCCACAAAAAGCAACAAAAAAAAGATTGTTTTTGTCACCAACAGCCGGGCTGACTATGGCAAGCTCAAGCC CTTAATGAAAGCCCTTAAGGATTTAGATTCTAAGCACCCTTTAAGTAACCAGATCGCTTATCGTATTTTTGTGTGCGGCA TGCACTTGTTAGAAAAATACGGGAACACTTACATTGAAATCTTAAAAGATGGTTTTGAGCATGTTGTTTTAAATAAGCCC TATGAAAATGAAATTTCTATGGATTTAGCTTTAGCCAACACCATCATGCAATTTTCTTCTTTCATCGTGCAAGAAAAACC GGATCTTATCATCGTGCATGGAGACAGGATAGAGAGTTTAGCGTGCGCGATTGTGGCGAGTTTCAATAACATTTTATGCG CTCATGTTGAAGGAGGGGAAGTTTCAGGAACGCTAGATGAAAGCATCCGCCATAGTGTGTCAAAACTCGCGCATATCCAT TATGTTTGCAACCAACAAGCCGAGCAAAATTTAATCCAAATGGGTGAAAAAATGGAGTGCATTTTTAATATTGGCTCGAG CGATATTGATGCGATGTTAGGCGATTTGCCTAGTTTTGAAGAAGTGGAGCGGTATTATTATCAGATCAAGCGTTTTAAAA AGGATTATGCAATTTTGATTTATCATCCTGTGGTGAGCGAGACGATTGAGTTGCCCAGACATATTTTTGAAGTGTTAGAG GGTGTTAGGGCGAGTTTAAAAAATTTTGTCGTGATTTATCCTAATAACGATCTAGGATCAAACATTATCCTAAAGGCTTT AGAGGGTTTAAAAGGGGATAGGCATTTCATTAGTTTCCCTAGCATGCGTTTTGAATATTTTTTGACGCTTTTAAAAAATG CCGCATTTATCATTGGCAATTCAAGCTGTGGGATTAGAGAAGCGGGGGTTTATGGCGTGCCATGCATCAATTGCGGCACT AGGCAACACAACAGAAGCGATGCAGAGCATATCATCAATGTCAAAGAGGATAAAGATGAGATTGCAATCGCTATAAAAAA AGCTCATCGTTTAAAAAGCGTTTTAAAAAAGAGCTCTCATTTTGGTCAAGGCGATAGCGTTAAGCGGTTTTTAGCGAGCT TGACTTCAGAATTATTTGACACGCCCACGCAAAAAAGCTTTGTGGTAAGAAAGGTTAGCGGATGA Protein sequence : MESPTKSNKKKIVFVTNSRADYGKLKPLMKALKDLDSKHPLSNQIAYRIFVCGMHLLEKYGNTYIEILKDGFEHVVLNKP YENEISMDLALANTIMQFSSFIVQEKPDLIIVHGDRIESLACAIVASFNNILCAHVEGGEVSGTLDESIRHSVSKLAHIH YVCNQQAEQNLIQMGEKMECIFNIGSSDIDAMLGDLPSFEEVERYYYQIKRFKKDYAILIYHPVVSETIELPRHIFEVLE GVRASLKNFVVIYPNNDLGSNIILKALEGLKGDRHFISFPSMRFEYFLTLLKNAAFIIGNSSCGIREAGVYGVPCINCGT RQHNRSDAEHIINVKEDKDEIAIAIKKAHRLKSVLKKSSHFGQGDSVKRFLASLTSELFDTPTQKSFVVRKVSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| synX | NP_273134.1 | polysialic acid capsule biosynthesis protein SynX | Not tested | IHT-A | Protein | 2e-58 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSH417_04100 | YP_006224454.1 | hypothetical protein | VFG0254 | Protein | 1e-58 | 43 |
