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Name : HPSH417_03310 (HPSH417_03310) Accession : YP_006224307.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Unknown Product : succinyl-CoA-transferase subunit A Function : - COG functional category : - COG ID : - EC number : - Position : 683903 - 684601 bp Length : 699 bp Strand : + Note : COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit DNA sequence : ATGAACAAGGTTATAACCGATTTAGACAAAGCATTGAGCGCTTTAAAAGACGGAGATACTATTTTAGTGGGCGGTTTTGG GCTGTGCGGGATACCCGAATACGCCATTGATTACATTTATAAAAAAGGCATCAAGGATTTGATTGTTGTGGGCAATAATT GCGGCGTTGATGACTTTGGGCTTGGCATTCTGTTAGAAAAAAAACAGATTAAAAAGATTATCGCTTCCTATGTGGGGGAG AATAAGATTTTTGAATCGCAAATGTTGAACGGAGAAATTGAAGTCGTTTTGACACCGCAAGGCACGCTAGCTGAAAACTT GCGCGCTGGAGGGGCTGGGATACCCGCTTACTACACCCCAACAGGGGTTGGAACTCTGATCGCTCAAGGCAAGGAATCAA GGGAATTTAACGGCAAGGAGTATATTTTAGAAAGAGCGATCACAGGCGATTATGGGCTTATCAAAGCCTATAAAAGCGAC ACTCTTGGAAACTTGGTGTTTAGAAAAACGGCTAGAAACTTTAATCCCTTGTGCGCGATGGCGGCAAAAATATGCGTCGC TGAAGTGGAAGAAATTGTTCCGGCCGGGGAATTGGACCCAGATGAAATACACTTGCCAGGAATCTATGTGCAACACATCT ATAAGGGCGAGAAGTTTGAAAAACGGATAGAAAAAATCACGACAAGGAGCGCGAAATGA Protein sequence : MNKVITDLDKALSALKDGDTILVGGFGLCGIPEYAIDYIYKKGIKDLIVVGNNCGVDDFGLGILLEKKQIKKIIASYVGE NKIFESQMLNGEIEVVLTPQGTLAENLRAGGAGIPAYYTPTGVGTLIAQGKESREFNGKEYILERAITGDYGLIKAYKSD TLGNLVFRKTARNFNPLCAMAAKICVAEVEEIVPAGELDPDEIHLPGIYVQHIYKGEKFEKRIEKITTRSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 8e-27 | 41 |
