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Name : HPSH417_02435 (HPSH417_02435) Accession : YP_006224134.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 486964 - 488409 bp Length : 1446 bp Strand : - Note : COG0174 Glutamine synthetase DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTGTTTTAAAGGCTGGCAAGGCATTGAGCACTCCGATATGATTTTAACCCCTGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAGCATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGTGCAGAGAACGAATTTTTCATCTTTGATTCCATTAAGATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAAGAGCTTTGAAAATGGCGTGAATTTTGGGCACAGACCGGGCAAGCA AGGGGGCTATCTGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTATATGGGGATAATGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTGGCGTTGCATTTTTTAGGGGGTGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTATAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTAACCTATTCGGCTAA CAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGTGCGAGGTTTGAATTCAGGTTTCCTGATAGCT CATCAAACCCCTACTTGGCTTTTTCAGCGATTTTAATGGCGGGTATGGATGGCGTTAAAAATAAGATCGATCCCGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAACAAATGCCCCACACTTTAAG GAGCTCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATTCAAGCTT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYLPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFSAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRSSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSH417_02435 | YP_006224134.1 | glutamine synthetase | VFG1399 | Protein | 6e-90 | 45 |
