Gene Information

Name : HPSH417_01570 (HPSH417_01570)
Accession : YP_006223961.1
Strain : Helicobacter pylori Shi417
Genome accession: NC_017739
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 315440 - 316321 bp
Length : 882 bp
Strand : +
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGCTAGGGAGCTATGGCGGGGAGGA
TTCGCCTGATGATATTTCGCGCGGGCTTTTTGCGGGTGAAGTGGGGATCCCACGGCTTTTGAAATTGTTTAAAAAATACC
ATCTCCCTGCGACTTGGTTTGCGCCTGGGCATTCTATTGAAACTTTCCCTGAACAAATGAAAATGATCGTGGATGCAGGG
CATGAAGTGGGTGCTCATGGGTATTCGCATGAAAACCCTATCGCTATGAGCGCCAAGCAAGAAGAAGATGTTTTGTTAAA
AAGTATTGAATTGATTAAAGATCTCACTGGCAAAGCCCCCACAGGCTATGTGGCACCGTGGTGGGAGTTTTCTAATATCA
CTAATAAATTGCTTTTAAAACACGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCCTATTTCGTGCGG
GTGGGGGATAGTTGGAGCAAGATTGATTATAGTTTGGAGGCTAAGGATTGGATGAAGCCTTTGATCCGTGGGGTGGAAAC
CGATTTGGTGGAAATTCCTGCGAATTGGTATTTGGACGATTTACCGCCGATGATGTTTATTAAAAAATCCCCCAATAGTT
TTGGTTTTGTAAGCCCGCACGATATAGGGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAGATGGATTATGCG
GTATTTAGCATGACAATCCACCCTGATGTGAGCGCCCGCCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAGCATAT
CAACAAACATGACCATGTGCGTTGGGTAACATTCAATGAAATCGCTGACGATTTCTTAAAACGAAGCCCTAGAAAAAAAT
AG

Protein sequence :
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAPTGYVAPWWEFSNITNKLLLKHGFKYDHSLMHNDFTPYFVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHDHVRWVTFNEIADDFLKRSPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 2e-109 75