Gene Information

Name : HPSH417_07585 (HPSH417_07585)
Accession : YP_006225127.1
Strain : Helicobacter pylori Shi417
Genome accession: NC_017739
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1578132 - 1579076 bp
Length : 945 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGACTTAAACAAACTCAAAGATTATAGGGCTTTAAGAAACGCTATTTTAAGGCTCTTGCCTTATTTAGATAGCGGTAT
TACAGAGCTGATTATGAACAAAGAAAAAGAAATTTGGCTCTATAAGCTTGATGGAACTAGAGAAAAAGTCTTTGATGAAA
ATTTAGATAAAGCCTTTATGCTTGGTTTTGGGGAACAATTAGCGAGTTTTAGAGATTTGTTCTTTAATACTAATTACCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATACAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCTAGCGAGAAAAAGTTTGATTTAAAAGCTTTCAAGCTTTCTGGTGTGTGTCAATACGACTATG
GGTATTTGCAAAAGCTGATGATTGAGGGTAAAAACTTACTCATTAGTGGAGGAACAGGCAGTGGAAAAACAAGTTTTTTA
AACGCTCTGATTGAATTTATCCCTAAACACACACGAATAGTGAGTGTAGAAGATAGCGAAGAATTAGATTTAAGAGCGTT
TGAAAATCATAAATCCTTGTTAGTGGATAAAACTGAAAGCTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGAGTCCTGATAGACTTATGGTAGGCGAGATTGACACACGAAATGCCTTGCTTTTTTTAAGGTTTGGCAACACAGGA
CATAAGGGAATGGTTTCTACTTTACATGCAGATAGTGTGCATGGGGTCATAGAGGCGATTGCTTTAAATCTGCAGATGAA
TAAAAGTGGTTTAGATGTTAGTGTAGCAAGAAAATTCTTTGAAAGCAGTGTAGATATTGTCGTTCAAATTGTGCTTGATA
AAGCCACTAACACTAGATATATTCAAGAAATCTTACCCACCAAAGAATTAGAAAGTAGCTTATGA

Protein sequence : 
MDLNKLKDYRALRNAILRLLPYLDSGITELIMNKEKEIWLYKLDGTREKVFDENLDKAFMLGFGEQLASFRDLFFNTNYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPSEKKFDLKAFKLSGVCQYDYGYLQKLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLRAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNALLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVSVARKFFESSVDIVVQIVLDKATNTRYIQEILPTKELESSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 3e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSH417_07585 YP_006225127.1 VirB11 type IV secretion ATPase VFG1979 Protein 6e-41 41