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Name : HPSH417_07495 (HPSH417_07495) Accession : YP_006225109.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 1550671 - 1551738 bp Length : 1068 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGCTAAATAACAAACTCACCAAATCTCAAAGAGAACTTTTTGATAATCTCAAAGTATTTTTATACACTAAGGTTAAAAA TTTCACACCTATTCAAGATGTGAATGATATGGCTTTGATATTAGATACGCAAAACAAAGTTTTAAAATGCAATAATGTTG AGCAATTAAGACAACTCTGTCATATTCTTTATAATCAAGGTATCAAACACACCATAATGATGCAAGGCTTGTTTTTATTC TTTGAATACTTTAGAGACAATCTGAAACTAAGAAGTTTTAGAATGCTTAGTGAAGAGCAAGTCATTAACTTTCTTTTTGA ACTCGCTCAAAATAGAAAACCAAGCTCTATGGCTAAGTATGTGATGTATTTAAGGCAATTCTTTGATTACTTGGATAGAA AAAAGCATTATAACTTTGACTTTGCCCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC TACAAGGATTTAAAGAGTTTTTTAAAAACACTTTTAGAATATAAGCCAACCACTAGCTTTGAAAAGCGCAATAAGTGTGT TTTACTCATTGTAATACTAGGAGGGCTTAGAAAATGCGAAGTGTTAAACATAGAGTTAAAACACATTCAAGTAGAAGAAC AAAACTACTCTATTTTAATTCAAGGTAAAGGCAGGAAAGAAAGAAAAGCTTATATCAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGATTACAGACTAAAATATTTCAATGGAGCATATCTCTTTAAAAAGGATAAGCAAAAATC ACAAAATTCTTTAACGCTTTATAATTTTATCCCCTTAATCTTTAAATTAGCCCAAATCAAACATTACAAACAATATGGCA CAGGCTTACATTTATTTAGACATAGTTTTGCTACGCTTATCTATCAAGAGACCCAAGACTTAGTTTTAACTTCAAGAGCT TTAGGGCATAGCTCATTACTCTCTACTAAGATTTATATCCATACCACACAAGAGCATAACAAGAAAGTAGCTCTTGTATT TGATAGTTTGATAGAGAATAAGAAGTAA Protein sequence : MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILDTQNKVLKCNNVEQLRQLCHILYNQGIKHTIMMQGLFLF FEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLN YKDLKSFLKTLLEYKPTTSFEKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDDYRLKYFNGAYLFKKDKQKSQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 2e-100 | 63 |
