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Name : HPSH417_05540 (HPSH417_05540) Accession : YP_006224732.1 Strain : Helicobacter pylori Shi417 Genome accession: NC_017739 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1155578 - 1156564 bp Length : 987 bp Strand : + Note : COG3736 Type IV secretory pathway, component VirB8 DNA sequence : ATGGAAAAAGTTTGCATGAACGCATGGGAGTTGCCTAAGGTTTTAGAAGAAAGATTAAAAGAAAAATATGGCGATGATTG GGAAAAATATGTTAAGGCTAAAGCAATAAACGAAGAAGAGCTTGAAGAACAAGTCAAAGATAAAGCCAAAGAGCAACAAA AGATACAAAGAGAAAAAACACTCAGTGGATTTTTAAAAAAAGTTGGTCTAAAAAAGCGTGATATGTTACAAAGCACTATG CTGTTTGATGGAGTCAAAGAAGCTGATGCGCTTTTTCAAGCAGAGCGTAAAATTGGCGATTGGATCTTTAGCAGTGCGGT ATTCTTTTTTGCTTTAGCTCTTATAGAAGCCATTATTATTATATGCTTATTGCCCTTAAAAGAAAAAGTGCCTTATTTGG TAACCTTTTCAAACGCTACACAAAATTTTGCCATAGTCCAAAGAGCAGACAAGAGTATTCGTGCCAATCAAGCGCTTATA AGACAACTGGTAGCATCTTATGTCAATAATAGAGAAAATATTTCAAATATAAAAGAGCAAAACGAAATAGCCCACGAAAC CATTAGATTGCAAAGTGCATTTGAAGTATGGGATTTTTTTGAAAAACTTGTTTCCTATGAACATAGCATTTACACTAATA TCAATCTAACACGAAAAATTAGCATTATCAATATCGCTTTAATTAGTAAAACCCAAGCCAATATTGAAATATCCGCACAA CTTTTTAATAAAGAAAAGTTAGAAAGCGAAAAGCGTTATAGAATAATTATGACCTTTGAATTTGAACCCATTGAAATTGA TACAAAATCTGTTCCCTTAAATCCTACAGGCTTTATTGTTACAGGTTATGATGTAACTGAAATTGCGATTTTAAAAGACC TAGATGAAAAAAATAAAGTCAAAGATGATGGTGTGAAATCTAGGATTATCCATACCGAGAAAAAAGACCCTCATATGAGC CAATATAAAGATGTTAAGGAACAATAA Protein sequence : MEKVCMNAWELPKVLEERLKEKYGDDWEKYVKAKAINEEELEEQVKDKAKEQQKIQREKTLSGFLKKVGLKKRDMLQSTM LFDGVKEADALFQAERKIGDWIFSSAVFFFALALIEAIIIICLLPLKEKVPYLVTFSNATQNFAIVQRADKSIRANQALI RQLVASYVNNRENISNIKEQNEIAHETIRLQSAFEVWDFFEKLVSYEHSIYTNINLTRKISIINIALISKTQANIEISAQ LFNKEKLESEKRYRIIMTFEFEPIEIDTKSVPLNPTGFIVTGYDVTEIAILKDLDEKNKVKDDGVKSRIIHTEKKDPHMS QYKDVKEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB8-1 | YP_002301100.1 | VirB8 type IV secretion protein | Virulence | cag PAI | Protein | 8e-62 | 55 |
